RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TBX4P57082 545 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 NNTQ13423 1086 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 TRIP4Q15650 581 aaPredicted RBP14.44□□□□□ -0.1
TUBB3-202ENST00000553656 SYPL2Q5VXT5 272 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 PHLDB2Q86SQ0 1253 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 TAC4Q86UU9 113 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 MCOLN2Q8IZK6 566 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 C3orf20Q8ND61 904 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 RIN3Q8TB24 985 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 EDAQ92838 391 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 OTUB2Q96DC9 234 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 EBF3Q9H4W6 596 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 GRPEL1Q9HAV7 217 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 TRPV5Q9NQA5 729 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 TAS2R14Q9NYV8 317 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 WNT16Q9UBV4 365 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 ZNF510Q9Y2H8 683 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 MYO10Q9HD67 2058 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 TRUB2O95900 331 aaKnown RBP14.43□□□□□ -0.1
TUBB3-202ENST00000553656 APOEP02649 317 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 KRT3P12035 628 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 CORO1AP31146 461 aaKnown RBP14.43□□□□□ -0.1
TUBB3-202ENST00000553656 GSCP56915 257 aaPredicted RBP14.43□□□□□ -0.1
TUBB3-202ENST00000553656 SIGLEC14Q08ET2 396 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 NR1H3Q13133 447 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
TUBB3-202ENST00000553656 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 NUGGCQ68CJ6 796 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 TRIM68Q6AZZ1 485 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 WDR59Q6PJI9 974 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 HTR3DQ70Z44 454 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 SND1Q7KZF4 910 aaKnown RBP eCLIP14.43□□□□□ -0.1
TUBB3-202ENST00000553656 UNC45BQ8IWX7 931 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 TC2NQ8N9U0 490 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 SPC24Q8NBT2 197 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 ADAM32Q8TC27 787 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 RNF34Q969K3 372 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 ZNF653Q96CK0 615 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 SHDQ96IW2 340 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 PANX2Q96RD6 677 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 FAM83CQ9BQN1 747 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 ARHGEF3Q9NR81 526 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 PARVAQ9NVD7 372 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 TMEM51Q9NW97 253 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 DDIT4Q9NX09 232 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 CA14Q9ULX7 337 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 TLR6Q9Y2C9 796 aa14.43□□□□□ -0.1
TUBB3-202ENST00000553656 SYNJ2BP-COX16A0A087WUM0 186 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 A0A087X0T9 212 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 M0QYT0 321 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 IRAK2O43187 625 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ADH1CP00326 375 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 FAM228BP0C875 321 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SLC2A3P11169 496 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ARSAP15289 507 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 RRM1P23921 792 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SDC4P31431 198 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SLC11A2P49281 568 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SULT1E1P49888 294 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 AMPD2Q01433 879 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 GFPT1Q06210 699 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 RING1Q06587 406 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 TNK2Q07912 1038 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 NME3Q13232 169 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 RUNX3Q13761 415 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 MLF2Q15773 248 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SLC18A3Q16572 532 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 EML3Q32P44 896 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 CCDC122Q5T0U0 273 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ALKBH5Q6P6C2 394 aaKnown RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 DCUN1D2Q6PH85 259 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ARCQ7LC44 396 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 DENND1CQ8IV53 801 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 BBS7Q8IWZ6 715 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 OLIG1Q8TAK6 271 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 KHSRPQ92945 711 aaKnown RBP eCLIP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ASIC4Q96FT7 647 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 MSANTD3Q96H12 275 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 ISCUQ9H1K1 167 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 MFSD1Q9H3U5 465 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 NHEJ1Q9H9Q4 299 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 GTSE1Q9NYZ3 720 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 COX16Q9P0S2 106 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 CNOT8Q9UFF9 292 aaKnown RBP14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SLC12A6Q9UHW9 1150 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 PAXBP1Q9Y5B6 917 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SCINQ9Y6U3 715 aa14.42□□□□□ -0.1
TUBB3-202ENST00000553656 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 ARNTLO00327 626 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 F9P00740 461 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 PDGFRAP16234 1089 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 ABCB4P21439 1286 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 CHKAP35790 457 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 FLT3P36888 993 aa14.41□□□□□ -0.1
TUBB3-202ENST00000553656 PRKCQQ04759 706 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms