RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MFAP3P55082 362 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 DAOAP59103 153 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 FOXK2Q01167 660 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 CSRP2Q16527 193 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 C10orf76Q5T2E6 689 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 BSPRYQ5W0U4 402 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 PMF1Q6P1K2 205 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 ZNF513Q8N8E2 541 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 IRGQQ8WZA9 623 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 NDRG1Q92597 394 aaKnown RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 KREMEN1Q96MU8 473 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 MED15Q96RN5 788 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 ZSWIM1Q9BR11 485 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 SEMA4GQ9NTN9 838 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 FBXO10Q9UK96 956 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 AGO1Q9UL18 857 aaKnown RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 HBS1LQ9Y450 684 aaKnown RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 GTPBP10A4D1E9 387 aaKnown RBP13.55□□□□□ -0.24
ACTN1-207ENST00000553290 YJEFN3A6XGL0 299 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 E7ENQ6 273 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 TRIM24O15164 1050 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 ADAM23O75077 832 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 FBXO21O94952 628 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 EPN2O95208 641 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 CYBBP04839 570 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 KRT5P13647 590 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 HARS2P49590 506 aaKnown RBP13.55□□□□□ -0.24
ACTN1-207ENST00000553290 DGKGP49619 791 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 RGS7P49802 495 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 TRIP4Q15650 581 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-207ENST00000553290 ELF2Q15723 593 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 MEA1Q16626 185 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 RSPO4Q2I0M5 234 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-207ENST00000553290 PLK5Q496M5 336 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 DENND1CQ8IV53 801 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 FMNL3Q8IVF7 1028 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 CPXM2Q8N436 756 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 MDGA1Q8NFP4 955 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 NUP62CLQ9H1M0 184 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 THAP9Q9H5L6 903 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 PCDHGA5Q9Y5G8 931 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 CEP250Q9BV73 2442 aa13.55□□□□□ -0.24
ACTN1-207ENST00000553290 SDK1Q7Z5N4 2213 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 MED7O43513 233 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 PENKP01210 267 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 CISD3P0C7P0 127 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 NTSR1P30989 418 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 EXOC3L4Q17RC7 722 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 FYB2Q5VWT5 728 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 SDE2Q6IQ49 451 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 FAM114A1Q8IWE2 563 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 EDEM1Q92611 657 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 BHMTQ93088 406 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 ARRDC1-AS1Q9H2J1 176 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 SLC27A6Q9Y2P4 619 aa13.54□□□□□ -0.24
ACTN1-207ENST00000553290 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.54□□□□□ -0.24
ACTN1-207ENST00000553290 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 DCLK1O15075 740 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 SART1O43290 800 aaKnown RBP13.53□□□□□ -0.24
ACTN1-207ENST00000553290 GABBR2O75899 941 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 LETM1O95202 739 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-207ENST00000553290 LATS1O95835 1130 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 CALCAP01258 141 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 LTFP02788 710 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ZNF806P0C7X5 589 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 HOXB2P14652 356 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 SLC9A1P19634 815 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 GBP1P32455 592 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 GPD2P43304 727 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ACADSBP45954 432 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 RPL34P49207 117 aaKnown RBP13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ZNF445P59923 1031 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms