RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DQX1	Q8TE96	717 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	EDEM1	Q92611	657 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	HAUS1	Q96CS2	278 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	CEP295NL	Q96MC4	621 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SEPT5	Q99719	369 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM118B	Q9BPY3	351 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	FUT8	Q9BYC5	575 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM129A	Q9BZQ8	928 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TRIM31	Q9BZY9	425 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	PRDM16	Q9HAZ2	1276 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	WDR6	Q9NNW5	1121 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	AAAS	Q9NRG9	546 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TMEM51	Q9NW97	253 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DDIT4	Q9NX09	232 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	MTMR10	Q9NXD2	777 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	COX16	Q9P0S2	106 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	STK39	Q9UEW8	545 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DNPEP	Q9ULA0	475 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM92A	A1XBS5	289 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	WDR27	A2RRH5	827 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	MAP2K7	O14733	419 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ADAM12	O43184	909 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	GJB5	O95377	273 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	IGLV3-25	P01717	112 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ITGAV	P06756	1048 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ZFX	P17010	805 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	OR1D2	P34982	312 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	CXCR3	P49682	368 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	OASL	Q15646	514 aa	Known RBP	13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ARL13B	Q3SXY8	428 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	MGAT5B	Q3V5L5	792 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	TMEM240	Q5SV17	173 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	SCD5	Q86SK9	330 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	TAC4	Q86UU9	113 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	MON1A	Q86VX9	555 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	C7orf61	Q8IZ16	206 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	FIBCD1	Q8N539	461 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ALLC	Q8N6M5	410 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	PQLC3	Q8N755	202 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	PCDH19	Q8TAB3	1148 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ADAM32	Q8TC27	787 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	ACTL9	Q8TC94	416 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	CLSTN3	Q9BQT9	956 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	SMOC2	Q9H3U7	446 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	HSFX1	Q9UBD0	423 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	AFF4	Q9UHB7	1163 aa	Known RBP	13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	FBXW11	Q9UKB1	542 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	SLC27A5	Q9Y2P5	690 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	SNX24	Q9Y343	169 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480	NEU2	Q9Y3R4	380 aa		13.19	□□□□□ -0.3
CACNB3-223	ENST00000552480		A0A1W2PQH9	124 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480		H3BRJ5	948 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	MCF2L	O15068	1137 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	IRAK2	O43187	625 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	SOAT2	O75908	522 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	SASH3	O75995	380 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	UROD	P06132	367 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	PECAM1	P16284	738 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	RPL17	P18621	184 aa	Known RBP	13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	YWHAQ	P27348	245 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	ADRA1B	P35368	520 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	ARL4A	P40617	200 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	RPL21	P46778	160 aa	Known RBP	13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	TUFM	P49411	452 aa	Known RBP	13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	USP46	P62068	366 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	DUSP4	Q13115	394 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	CASP8	Q14790	479 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	NOMO1	Q15155	1222 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	TPGS2	Q68CL5	300 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	DENND5B	Q6ZUT9	1274 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	GSTA5	Q7RTV2	222 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	GPR65	Q8IYL9	337 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	PLD5	Q8N7P1	536 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	CCHCR1	Q8TD31	782 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	FBXO32	Q969P5	355 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	CSPG4P5	Q96PW8	444 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	NEUROG2	Q9H2A3	272 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	CRISPLD1	Q9H336	500 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	GRHL1	Q9NZI5	618 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	WHRN	Q9P202	907 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	PCDH10	Q9P2E7	1040 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	ASIC3	Q9UHC3	531 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	ZNF148	Q9UQR1	794 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	PCDHB12	Q9Y5F1	795 aa		13.18	□□□□□ -0.3
CACNB3-223	ENST00000552480	C2CD2L	O14523	706 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	ABLIM3	O94929	683 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	KRT14	P02533	472 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM153B	P0C7A2	387 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	ATF2	P15336	505 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	KLRC2	P26717	231 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	PSEN1	P49768	467 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	ZNF135	P52742	658 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	EIF3E	P60228	445 aa	Known RBP	13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	CREM	Q03060	361 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	FAM153C	Q494X1	144 aa		13.17	□□□□□ -0.3
CACNB3-223	ENST00000552480	BRMS1L	Q5PSV4	323 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms