RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RALGAPA2Q2PPJ7 1873 aa5.59□□□□□ -1.51
SCAF11-214ENST00000550893 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ABCB11O95342 1321 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 A0A1W2PPC1 479 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 hCG_1642624A0A1W2PR95 340 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 KLRF2D3W0D1 207 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 HAS3O00219 553 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ZBTB5O15062 677 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 PRC1O43663 620 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 DTNBO60941 627 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 RARBP10826 455 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 KRT4P19013 534 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 CALML3P27482 149 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 HOXA13P31271 388 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 PTPN7P35236 360 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 NT5C2P49902 561 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ERVK-21P61565 698 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 FAM189BP81408 668 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 SHHQ15465 462 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 BMT2Q1RMZ1 405 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ANO4Q32M45 955 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 IFIT1BQ5T764 474 aaKnown RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 DRICH1Q6PGQ1 229 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 APOA5Q6Q788 366 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 CXCL17Q6UXB2 119 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 TMTC3Q6ZXV5 915 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 OR7D4Q8NG98 312 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 OR10H5Q8NGA6 315 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 SLC35B2Q8TB61 432 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 BADQ92934 168 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 KRT23Q9C075 422 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 SLITRK6Q9H5Y7 841 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 DMRT3Q9NQL9 472 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 PXMP2Q9NR77 195 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 CCM2LQ9NUG4 571 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 DNAJC28Q9NX36 388 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 TRPM5Q9NZQ8 1165 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ATP11BQ9Y2G3 1177 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 SNX14Q9Y5W7 946 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 NCOR1O75376 2440 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 PLXNA4Q9HCM2 1894 aa5.58□□□□□ -1.52
SCAF11-214ENST00000550893 PRRC2BQ5JSZ5 2229 aaKnown RBP5.58□□□□□ -1.52
SCAF11-214ENST00000550893 ELP1O95163 1332 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 LOC102724159A0A0B4J2E5 919 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 ITGB1P05556 798 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 MMP3P08254 477 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 PARP1P09874 1014 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 HSPA4P34932 840 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 LIFRP42702 1097 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 INHBCP55103 352 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 EVCP57679 992 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 NHLH2Q02577 135 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TNFAIP2Q03169 654 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 PPP3CAQ08209 521 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 PGM5Q15124 567 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 PWP2Q15269 919 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 EFCAB12Q6NXP0 572 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 GDF7Q7Z4P5 450 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 IQCA1Q86XH1 822 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 CCAR1Q8IX12 1150 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TDHQ8IZJ6 230 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 FBXO18Q8NFZ0 1043 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 NCOA7Q8NI08 942 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 INPP4AQ96PE3 977 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 DCLRE1CQ96SD1 692 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 MAP3K14Q99558 947 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 MENTQ9BUN1 341 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TRPV6Q9H1D0 765 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 KAT14Q9H8E8 782 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 BCO1Q9HAY6 547 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 RBM12Q9NTZ6 932 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TRMT13Q9NUP7 481 aaKnown RBP5.57□□□□□ -1.52
SCAF11-214ENST00000550893 CTNNA3Q9UI47 895 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 CHST2Q9Y4C5 530 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 TTC3P53804 2025 aa5.57□□□□□ -1.52
SCAF11-214ENST00000550893 MYO7AQ13402 2215 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 MYH15Q9Y2K3 1946 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 A0A087X1B8 175 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 ASB14A6NK59 587 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 KBTBD13C9JR72 458 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 IFIT3O14879 490 aaKnown RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 PQBP1O60828 265 aaKnown RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 LARGE1O95461 756 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 CLTBP09497 229 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 OSMP13725 252 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 ZSCAN20P17040 1043 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 ECHS1P30084 290 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 MTNR1BP49286 362 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 RNASE9P60153 205 aaKnown RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 KRTAP1-1Q07627 177 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 IKQ13123 557 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-214ENST00000550893 WTAPQ15007 396 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 UBE2SQ16763 222 aa5.56□□□□□ -1.52
SCAF11-214ENST00000550893 LY6KQ17RY6 165 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms