RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 EBF3Q9H4W6 596 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 TRPV5Q9NQA5 729 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 ABHD10Q9NUJ1 306 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 TAS2R14Q9NYV8 317 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 WDR35Q9P2L0 1181 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 TBC1D14Q9P2M4 693 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 ADAMTS1Q9UHI8 967 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 TECTAO75443 2155 aa16.94■□□□□ 0.3
CHMP1A-209ENST00000550872 F5P12259 2224 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ARNTLO00327 626 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 MSI1O43347 362 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 DAB1O75553 588 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ADCY5O95622 1261 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 GZMAP12544 262 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ARSAP15289 507 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 KPNA1P52294 538 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 RUNX3Q13761 415 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 TRIP4Q15650 581 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 IER5LQ5T953 404 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 MON1BQ7L1V2 547 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 MCOLN2Q8IZK6 566 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 SIX5Q8N196 739 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ADAM32Q8TC27 787 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 PLD4Q96BZ4 506 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 SERPINB11Q96P15 392 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 HEBP1Q9NRV9 189 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 GTSE1Q9NYZ3 720 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
CHMP1A-209ENST00000550872 RTN2O75298 545 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 FTLP02792 175 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 CORO1AP31146 461 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 NOS2P35228 1153 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 EIF4A3P38919 411 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 TBX4P57082 545 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 MLF2Q15773 248 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 EML3Q32P44 896 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 ITPRIPL2Q3MIP1 535 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 WDR59Q6PJI9 974 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 TAC4Q86UU9 113 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 ADGRG2Q8IZP9 1017 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 CPA6Q8N4T0 437 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 ATP2A3Q93084 1043 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 OTUB2Q96DC9 234 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 ARHGEF3Q9NR81 526 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 METTL5Q9NRN9 209 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 ZNF510Q9Y2H8 683 aa16.92■□□□□ 0.3
CHMP1A-209ENST00000550872 KRBA1A5PL33 1030 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 FAM86C2PA6NEL3 165 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 TMEM221A6NGB7 291 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 M0R296 226 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 GREM1O60565 184 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 NFATC1O95644 943 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 KLKB1P03952 638 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 GBP1P32455 592 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 MATKP42679 507 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 HARS2P49590 506 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 PITX1P78337 314 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 NR1H3Q13133 447 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 Q6ZNB5 142 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 DNAAF5Q86Y56 855 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 SHDQ96IW2 340 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 VCPIP1Q96JH7 1222 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 SELENOOQ9BVL4 669 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 C8orf33Q9H7E9 229 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 FAM204AQ9H8W3 233 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 TMEM59LQ9UK28 342 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 STAP1Q9ULZ2 295 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 PIAS3Q9Y6X2 628 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 MUC6Q6W4X9 2439 aa16.91■□□□□ 0.3
CHMP1A-209ENST00000550872 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 SYNJ2BP-COX16A0A087WUM0 186 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 A0A087X0T9 212 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 STK25O00506 426 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 GJB6O95452 261 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 FAM228BP0C875 321 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 KRT3P12035 628 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 FLT3P36888 993 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 SOX9P48436 509 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 GSCP56915 257 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 PRKCQQ04759 706 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 RING1Q06587 406 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 NNTQ13423 1086 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 DNAJC24Q6P3W2 148 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 TPRG1Q6ZUI0 275 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 DENND1CQ8IV53 801 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 EMC1Q8N766 993 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 TC2NQ8N9U0 490 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 CHP1Q99653 195 aa16.9■□□□□ 0.3
CHMP1A-209ENST00000550872 DDX23Q9BUQ8 820 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms