RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TRIM62Q9BVG3 475 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 C8orf33Q9H7E9 229 aaPredicted RBP23.52■■□□□ 1.36
BRF1-216ENST00000550208 TBC1D17Q9HA65 648 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 HBS1LQ9Y450 684 aaKnown RBP23.52■■□□□ 1.36
BRF1-216ENST00000550208 COL4A2P08572 1712 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 PRR33A8MZF0 331 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 SPECC1L-ADORA2AF8WAN1 911 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 GOLGA8SH3BPF8 625 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 HSF2BPO75031 334 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 GLULP15104 373 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 NSFP46459 744 aaKnown RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 MLLT6P55198 1093 aaPredicted RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 RNASE9P60153 205 aaKnown RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 PITX1P78337 314 aaPredicted RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 DHCR24Q15392 516 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 DCAF6Q58WW2 860 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 HGSNATQ68CP4 663 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 ACAD10Q6JQN1 1059 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 RHBDF2Q6PJF5 856 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 Q6ZNB5 142 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 SLC26A9Q7LBE3 791 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 PHF13Q86YI8 300 aaPredicted RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 CPA6Q8N4T0 437 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 TAS2R14Q9NYV8 317 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 ADAM22Q9P0K1 906 aa23.51■■□□□ 1.35
BRF1-216ENST00000550208 MTF2Q9Y483 593 aaPredicted RBP23.51■■□□□ 1.35
BRF1-216ENST00000550208 DDX3XO00571 662 aaKnown RBP eCLIP23.5■■□□□ 1.35
BRF1-216ENST00000550208 NFATC1O95644 943 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 CORO1AP31146 461 aaKnown RBP23.5■■□□□ 1.35
BRF1-216ENST00000550208 GJA4P35212 333 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 TXNDC11Q6PKC3 985 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 ZNF852Q6ZMS4 543 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 TMC6Q7Z403 805 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 TAC4Q86UU9 113 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 DENND1CQ8IV53 801 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 FBXL6Q8N531 539 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 FAM3CQ92520 227 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 PLD4Q96BZ4 506 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 OTUB2Q96DC9 234 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 FOXQ1Q9C009 403 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 DCLK3Q9C098 648 aa23.5■■□□□ 1.35
BRF1-216ENST00000550208 AGO1Q9UL18 857 aaKnown RBP23.5■■□□□ 1.35
BRF1-216ENST00000550208 KANSL1LA0AUZ9 987 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 TMCO5BA8MYB1 307 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 MAN2B1O00754 1011 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 PI15O43692 258 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 TRUB2O95900 331 aaKnown RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 CYP17A1P05093 508 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 PLEKP08567 350 aaPredicted RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 CTHP32929 405 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 SCNN1AP37088 669 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 ZNF75DP51815 510 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 TBX4P57082 545 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 NR1H3Q13133 447 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 TRIM14Q14142 442 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 LY6G5CQ5SRR4 150 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 FAM102AQ5T9C2 384 aaPredicted RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 CWF19L1Q69YN2 538 aaKnown RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 RALGPS2Q86X27 583 aaPredicted RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 CHFRQ96EP1 664 aa23.49■■□□□ 1.35
BRF1-216ENST00000550208 BZW2Q9Y6E2 419 aaKnown RBP23.49■■□□□ 1.35
BRF1-216ENST00000550208 FAM170BA6NMN3 283 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 DAB1O75553 588 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 SERPING1P05155 500 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 NOS2P35228 1153 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 CDK17Q00537 523 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 TBX2Q13207 712 aaPredicted RBP23.48■■□□□ 1.35
BRF1-216ENST00000550208 DNAAF5Q86Y56 855 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 TMEM25Q86YD3 366 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 LTB4R2Q9NPC1 389 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.48■■□□□ 1.35
BRF1-216ENST00000550208 TMEM59LQ9UK28 342 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 ZNF510Q9Y2H8 683 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 MYOFQ9NZM1 2061 aa23.48■■□□□ 1.35
BRF1-216ENST00000550208 GJB6O95452 261 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 IGLV3-25P01717 112 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 IGLV3-27P01718 113 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 HNRNPH3P31942 346 aaKnown RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 MATKP42679 507 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 HARS2P49590 506 aaKnown RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 ADKP55263 362 aaKnown RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 UBXN2BQ14CS0 331 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 GAB4Q2WGN9 574 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 TDRD12Q587J7 1177 aaKnown RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 NAIF1Q69YI7 327 aaPredicted RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 ASTLQ6HA08 431 aaPredicted RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 MON1BQ7L1V2 547 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 MCOLN2Q8IZK6 566 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 OR8K1Q8NGG5 319 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 SLC39A13Q96H72 371 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 FCRL2Q96LA5 508 aaPredicted RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 SERPINB11Q96P15 392 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 SPHK2Q9NRA0 654 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 NDRG2Q9UN36 371 aaKnown RBP23.47■■□□□ 1.35
BRF1-216ENST00000550208 TLR6Q9Y2C9 796 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 F5P12259 2224 aa23.47■■□□□ 1.35
BRF1-216ENST00000550208 CALB1P05937 261 aa23.46■■□□□ 1.35
BRF1-216ENST00000550208 TARSP26639 723 aaKnown RBP23.46■■□□□ 1.35
BRF1-216ENST00000550208 GALK1P51570 392 aa23.46■■□□□ 1.35
BRF1-216ENST00000550208 CLCN5P51795 746 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms