RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TSPY26PQ9H489 355 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 POPDC2Q9HBU9 364 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CACNA1HO95180 2353 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 GLI1P08151 1106 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 CHKAP35790 457 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 FANCCQ00597 558 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 CDR2Q01850 454 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 TRIP4Q15650 581 aaPredicted RBP27.09■■□□□ 1.93
CPSF6-205ENST00000550075 ANO4Q32M45 955 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 FBXO43Q4G163 708 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 PREPLQ4J6C6 727 aaPredicted RBP27.09■■□□□ 1.93
CPSF6-205ENST00000550075 EFHC1Q5JVL4 640 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 FSTL4Q6MZW2 842 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 ZDHHC17Q8IUH5 632 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 SERPINB11Q96P15 392 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 ASNSD1Q9NWL6 643 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 WDR35Q9P2L0 1181 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 SFMBT1Q9UHJ3 866 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 NOCTQ9UK39 431 aaKnown RBP27.09■■□□□ 1.93
CPSF6-205ENST00000550075 MYO6Q9UM54 1294 aa27.09■■□□□ 1.93
CPSF6-205ENST00000550075 GALK1P51570 392 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 YWHAZP63104 245 aaKnown RBP27.08■■□□□ 1.93
CPSF6-205ENST00000550075 TCF15Q12870 199 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 NNTQ13423 1086 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 PPP2R5DQ14738 602 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 PTPN20Q4JDL3 420 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 OR6B2Q6IFH4 312 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 LRSAM1Q6UWE0 723 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 TRIM72Q6ZMU5 477 aa27.08■■□□□ 1.93
CPSF6-205ENST00000550075 RBM12Q9NTZ6 932 aaKnown RBP27.08■■□□□ 1.93
CPSF6-205ENST00000550075 HSF2BPO75031 334 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 LATS1O95835 1130 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 MMEP08473 750 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 OPRD1P41143 372 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 NUGGCQ68CJ6 796 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 ERICH1Q86X53 443 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 DENND1CQ8IV53 801 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 DQX1Q8TE96 717 aaKnown RBP27.07■■□□□ 1.92
CPSF6-205ENST00000550075 NAP1L5Q96NT1 182 aaPredicted RBP27.07■■□□□ 1.92
CPSF6-205ENST00000550075 MARK1Q9P0L2 795 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 TJP2Q9UDY2 1190 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 MYOFQ9NZM1 2061 aa27.07■■□□□ 1.92
CPSF6-205ENST00000550075 MSI1O43347 362 aaKnown RBP27.06■■□□□ 1.92
CPSF6-205ENST00000550075 KLKB1P03952 638 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 ERBB2P04626 1255 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 TPM3P06753 285 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 FERP16591 822 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 CCR3P51677 355 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 UBASH3AP57075 661 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 RING1Q06587 406 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 MTAPQ13126 283 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 GAB4Q2WGN9 574 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 FAM183BPQ6ZVS7 135 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 TMEM25Q86YD3 366 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 UNC45BQ8IWX7 931 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 SPEM1Q8N4L4 309 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 SLC20A1Q8WUM9 679 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 XPO6Q96QU8 1125 aaKnown RBP27.06■■□□□ 1.92
CPSF6-205ENST00000550075 PNKPQ96T60 521 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 BBS2Q9BXC9 721 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 FBXO4Q9UKT5 387 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 AGO1Q9UL18 857 aaKnown RBP27.06■■□□□ 1.92
CPSF6-205ENST00000550075 KIAA1549LQ6ZVL6 1849 aa27.06■■□□□ 1.92
CPSF6-205ENST00000550075 EGFP01133 1207 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 CYBBP04839 570 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 APODP05090 189 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 TBX4P57082 545 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 ZNF445P59923 1031 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 NOMO3P69849 1222 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 ARID5AQ03989 594 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 NR1I3Q14994 352 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 NAIF1Q69YI7 327 aaPredicted RBP27.05■■□□□ 1.92
CPSF6-205ENST00000550075 OLFML1Q6UWY5 402 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 MAMSTRQ6ZN01 415 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 TPGS1Q6ZTW0 290 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 SLC26A9Q7LBE3 791 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 CPXM2Q8N436 756 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 C18orf8Q96DM3 657 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 NAALADL1Q9UQQ1 740 aa27.05■■□□□ 1.92
CPSF6-205ENST00000550075 NEDD8-MDP1E9PL57 170 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 H0Y858 1186 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 FYNP06241 537 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 SCNN1AP37088 669 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 FMO1Q01740 532 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 SLC6A3Q01959 620 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 NAA35Q5VZE5 725 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 Q6ZS52 159 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 NUDT18Q6ZVK8 323 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 FBRSL1Q9HCM7 1045 aaKnown RBP27.04■■□□□ 1.92
CPSF6-205ENST00000550075 ARHGEF4Q9NR80 690 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 DEC1Q9P2X7 70 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 TLR6Q9Y2C9 796 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 CACNA1IQ9P0X4 2223 aa27.04■■□□□ 1.92
CPSF6-205ENST00000550075 ATG13O75143 517 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 DAB1O75553 588 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 IGLV3-27P01718 113 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 TYRP14679 529 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 GABRB2P47870 512 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 CDK17Q00537 523 aa27.03■■□□□ 1.92
CPSF6-205ENST00000550075 DCAF6Q58WW2 860 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms