RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 ADRA1BP35368 520 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 DEFB103AP81534 67 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 OTUD4Q01804 1114 aaKnown RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 OTUD1Q5VV17 481 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 FIBCD1Q8N539 461 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 FMO2Q99518 471 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 TTLL2Q9BWV7 592 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 WDCPQ9H6R7 721 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 ZNF446Q9NWS9 450 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 FNIP2Q9P278 1114 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 NAALADL1Q9UQQ1 740 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
CACNB3-212ENST00000549971 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
CACNB3-212ENST00000549971 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 PTPRDP23468 1912 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 HACD1B0YJ81 288 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 NCAM2O15394 837 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 CCR1P32246 355 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 ACTN2P35609 894 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 PPP3CCP48454 512 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 ROR1Q01973 937 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 NME3Q13232 169 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 PLD1Q13393 1074 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 SNX1Q13596 522 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 FAM131BQ86XD5 332 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 CDKL3Q8IVW4 592 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 GOLGA6L1Q8N7Z2 621 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 ATG4AQ8WYN0 398 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 ACSF2Q96CM8 615 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 CSPG4P5Q96PW8 444 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 HAPLN3Q96S86 360 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 EPAS1Q99814 870 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 TRIM51Q9BSJ1 452 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 MRPL17Q9NRX2 175 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
CACNB3-212ENST00000549971 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
CACNB3-212ENST00000549971 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 HTTP42858 3142 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 IRAK2O43187 625 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ABLIM3O94929 683 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 SEC31AO94979 1220 aaKnown RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 C1RP00736 705 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 KRT14P02533 472 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 CD48P09326 243 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 CSH1P0DML2 217 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 CSH2P0DML3 217 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 MYBL2P10244 700 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 IL4RP24394 825 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 SERPINB6P35237 376 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ADCY8P40145 1251 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 KCNJ1P48048 391 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ARPP19P56211 112 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 NRG1Q02297 640 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 RAB33AQ14088 237 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 PPP6R3Q5H9R7 873 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-212ENST00000549971 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
CACNB3-212ENST00000549971 TAC4Q86UU9 113 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms