RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 CNTN6Q9UQ52 1028 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 ADAM23O75077 832 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 ZNF132P52740 706 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 BSPRYQ5W0U4 402 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 RRAGAQ7L523 313 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 ARHGEF19Q8IW93 802 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 MLKLQ8NB16 471 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 RBBP8NLQ8NC74 664 aaPredicted RBP19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 MDGA1Q8NFP4 955 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 ARRDC1-AS1Q9H2J1 176 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 ABCC13Q9NSE7 274 aa19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-207ENST00000549328 SLC12A8A0AV02 714 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 TRIM24O15164 1050 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 PENKP01210 267 aaPredicted RBP19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 CISD3P0C7P0 127 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 ZNF806P0C7X5 589 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 DGKGP49619 791 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 CPXM2Q8N436 756 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 OLIG1Q8TAK6 271 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 RNF139Q8WU17 664 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 IRGQQ8WZA9 623 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 NDRG1Q92597 394 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 PLD4Q96BZ4 506 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 HSFY1Q96LI6 401 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 KREMEN1Q96MU8 473 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 ZSWIM1Q9BR11 485 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 RTKNQ9BST9 563 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 TPSD1Q9BZJ3 242 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 INTS2Q9H0H0 1204 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 AGO1Q9UL18 857 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 SLC27A6Q9Y2P4 619 aa19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 HBS1LQ9Y450 684 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-207ENST00000549328 YJEFN3A6XGL0 299 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 E7ENQ6 273 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 DCLK1O15075 740 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 HMBSP08397 361 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 NTSR1P30989 418 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 ATXN1P54253 815 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 DAOAP59103 153 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 TRIP4Q15650 581 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 PLA2G2CQ5R387 149 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 PMF1Q6P1K2 205 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 ENOSF1Q7L5Y1 443 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 DENND1CQ8IV53 801 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 FAM81BQ96LP2 452 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 MED15Q96RN5 788 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 HCN2Q9UL51 889 aa19.51■□□□□ 0.71
CHMP1A-207ENST00000549328 PRRT4C9JH25 899 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 M0QYV0 167 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 GABBR2O75899 941 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 CYBBP04839 570 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 LCP1P13796 627 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 BRD2P25440 801 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 GBP1P32455 592 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 HARS2P49590 506 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 BYSLQ13895 437 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 FYB2Q5VWT5 728 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 SMYD5Q6GMV2 418 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 SDE2Q6IQ49 451 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 FMNL3Q8IVF7 1028 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 FAM217AQ8IXS0 508 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 UBE2TQ9NPD8 197 aaPredicted RBP19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 ZDHHC4Q9NPG8 344 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 PLK2Q9NYY3 685 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 DNAH14Q0VDD8 3507 aa19.5■□□□□ 0.71
CHMP1A-207ENST00000549328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 GFRA2O00451 464 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 SLC30A4O14863 429 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 FBXO21O94952 628 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 MPLP40238 635 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 P2RY2P41231 377 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 RGS7P49802 495 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 MEA1Q16626 185 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 PMS2CLQ68D20 193 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 MSANTD2Q6P1R3 559 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 TOGARAM2Q6ZUX3 1019 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 EDEM1Q92611 657 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 BHMTQ93088 406 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 SLC2A11Q9BYW1 496 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 CLSTN2Q9H4D0 955 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 VPS45Q9NRW7 570 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 BCCIPQ9P287 314 aaKnown RBP eCLIP19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 INVSQ9Y283 1065 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 ABCA7Q8IZY2 2146 aa19.49■□□□□ 0.71
CHMP1A-207ENST00000549328 TCRBV21S2A2A0A5A6 115 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 BCLAF3A2AJT9 711 aaKnown RBP19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 LATS1O95835 1130 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 HOXB2P14652 356 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 RPL34P49207 117 aaKnown RBP19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 MFAP3P55082 362 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 ZNF445P59923 1031 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 EGFLAMQ63HQ2 1017 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 TRIM65Q6PJ69 517 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 CLEC17AQ6ZS10 378 aa19.48■□□□□ 0.71
CHMP1A-207ENST00000549328 IRF2BP1Q8IU81 584 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms