RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 UBA3Q8TBC4 463 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 NETO1Q8TDF5 533 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 IRGQQ8WZA9 623 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 WBP2Q969T9 261 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 PLD4Q96BZ4 506 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 HSFY1Q96LI6 401 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 RTKNQ9BST9 563 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 ULBP1Q9BZM6 244 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 HBS1LQ9Y450 684 aaKnown RBP11.93□□□□□ -0.5
BEST3-209ENST00000548658 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 WDR87Q6ZQQ6 2873 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 SLC12A8A0AV02 714 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 SGK1O00141 431 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 NPC1O15118 1278 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 MED7O43513 233 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 FBXO21O94952 628 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 EPN2O95208 641 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 ZNF806P0C7X5 589 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 HOXC13P31276 330 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 GBP1P32455 592 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 MFAP3P55082 362 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 ADIGQ0VDE8 80 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 PLK5Q496M5 336 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 EMC10Q5UCC4 262 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 PRR23CQ6ZRP0 262 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 CREBRFQ8IUR6 639 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 CPXM2Q8N436 756 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 C12orf50Q8NA57 414 aaPredicted RBP11.92□□□□□ -0.5
BEST3-209ENST00000548658 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
BEST3-209ENST00000548658 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
BEST3-209ENST00000548658 SPACA7Q96KW9 195 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 PARD6AQ9NPB6 346 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 POLR3BQ9NW08 1133 aaPredicted RBP11.92□□□□□ -0.5
BEST3-209ENST00000548658 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
BEST3-209ENST00000548658 DACH1Q9UI36 760 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.92□□□□□ -0.5
BEST3-209ENST00000548658 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
BEST3-209ENST00000548658 SPAG17Q6Q759 2223 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 RALGAPA1Q6GYQ0 2036 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 YJEFN3A6XGL0 299 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 E7ENQ6 273 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 M0QYV0 167 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TULP2O00295 520 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 GFRA2O00451 464 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 SART1O43290 800 aaKnown RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 PENKP01210 267 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 KLKB1P03952 638 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 HMBSP08397 361 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 NTSR1P30989 418 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 CORO1AP31146 461 aaKnown RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 ZNF132P52740 706 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 MESP2Q0VG99 397 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TRIP4Q15650 581 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 MEA1Q16626 185 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TPD52L1Q16890 204 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 SPDYCQ5MJ68 293 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 GBP6Q6ZN66 633 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 DENND1CQ8IV53 801 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 CHPFQ8IZ52 775 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 PGBD3Q8N328 593 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 MDGA1Q8NFP4 955 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 UCMAQ8WVF2 138 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 INTS2Q9H0H0 1204 aaKnown RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 ARRDC1-AS1Q9H2J1 176 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 UBE2TQ9NPD8 197 aaPredicted RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 VPS45Q9NRW7 570 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 AGO1Q9UL18 857 aaKnown RBP11.91□□□□□ -0.5
BEST3-209ENST00000548658 SLC27A6Q9Y2P4 619 aa11.91□□□□□ -0.5
BEST3-209ENST00000548658 MYO18AQ92614 2054 aaKnown RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 RNF225M0QZC1 329 aaPredicted RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 TIMM44O43615 452 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 ADAM23O75077 832 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 LATS1O95835 1130 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 CISD3P0C7P0 127 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 KRT5P13647 590 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 LCP1P13796 627 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 HOXB2P14652 356 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 MPLP40238 635 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 DPP6P42658 865 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 ACADSBP45954 432 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 ATXN1P54253 815 aaKnown RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 DAOAP59103 153 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 MPPE1Q53F39 396 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
BEST3-209ENST00000548658 PMF1Q6P1K2 205 aa11.9□□□□□ -0.5
BEST3-209ENST00000548658 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms