RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CEP192Q8TEP8 1941 aa17.33■□□□□ 0.37
SSH1-208ENST00000548522 FAM221BA6H8Z2 402 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 KCNJ18B7U540 433 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 NDUFS2O75306 463 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 STC2O76061 302 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 HLA-DRAP01903 254 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 SYPP08247 313 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 IL12RB1P42701 662 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 TRIP6Q15654 476 aaKnown RBP17.33■□□□□ 0.36
SSH1-208ENST00000548522 GEN1Q17RS7 908 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 SGSM1Q2NKQ1 1148 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 RESP18Q5W5W9 173 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 UNC93AQ86WB7 457 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 NAXDQ8IW45 347 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 ZCCHC9Q8N567 271 aaKnown RBP17.33■□□□□ 0.36
SSH1-208ENST00000548522 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 TOE1Q96GM8 510 aaKnown RBP17.33■□□□□ 0.36
SSH1-208ENST00000548522 HNRNPABQ99729 332 aaKnown RBP17.33■□□□□ 0.36
SSH1-208ENST00000548522 IL21RQ9HBE5 538 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 NAGPAQ9UK23 515 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.36
SSH1-208ENST00000548522 H0Y626 953 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 ZBTB24O43167 697 aaPredicted RBP17.32■□□□□ 0.36
SSH1-208ENST00000548522 TRIM16O95361 564 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 NR3C1P04150 777 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 FTH1P19P0C7X4 201 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 P4HA1P13674 534 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 CD58P19256 250 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 CD6P30203 668 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 MFAP3P55082 362 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 GOLGA8FQ08AF8 430 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 GOLGA8DPQ0D2H9 430 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 INCA1Q0VD86 236 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 ZNF423Q2M1K9 1284 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 FYB2Q5VWT5 728 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 PROSER1Q86XN7 944 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 SLC9A9Q8IVB4 645 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 GPR174Q9BXC1 333 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
SSH1-208ENST00000548522 SERTAD1Q9UHV2 236 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 FBXO10Q9UK96 956 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 CLEC4EQ9ULY5 219 aa17.32■□□□□ 0.36
SSH1-208ENST00000548522 MEI4A8MW99 385 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 GFRA2O00451 464 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 ACTN4O43707 911 aaKnown RBP17.31■□□□□ 0.36
SSH1-208ENST00000548522 PENKP01210 267 aaPredicted RBP17.31■□□□□ 0.36
SSH1-208ENST00000548522 RPN1P04843 607 aaKnown RBP17.31■□□□□ 0.36
SSH1-208ENST00000548522 HMBSP08397 361 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 TRIM49P0CI25 452 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 TRIM49CP0CI26 452 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 NCAM1P13591 858 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 ME1P48163 572 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 KIF11P52732 1056 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 SCAPQ12770 1279 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 KMT5BQ4FZB7 885 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 CEP135Q66GS9 1140 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 KLHDC10Q6PID8 442 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 TAS1R2Q8TE23 839 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 SORCS1Q8WY21 1168 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 CYFIP2Q96F07 1278 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 FAM124BQ9H5Z6 455 aaPredicted RBP17.31■□□□□ 0.36
SSH1-208ENST00000548522 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 EXOC1Q9NV70 894 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 WSB2Q9NYS7 404 aaPredicted RBP17.31■□□□□ 0.36
SSH1-208ENST00000548522 RASAL2Q9UJF2 1139 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 SLCO1B1Q9Y6L6 691 aa17.31■□□□□ 0.36
SSH1-208ENST00000548522 IGSF10Q6WRI0 2623 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 PRKCHP24723 683 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 PLA2G4AP47712 749 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 GCLMP48507 274 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 BNC1Q01954 994 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 SLC14A1Q13336 389 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 STARD3Q14849 445 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 WDR45BQ5MNZ6 344 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 SYCP2LQ5T4T6 812 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 C19orf48Q6RUI8 117 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 CCDC186Q7Z3E2 898 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 ADAMTS14Q8WXS8 1223 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 TAF4BQ92750 862 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 FOXJ1Q92949 421 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 PAGE5Q96GU1 130 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 NT5C1AQ9BXI3 368 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 MIR1-1HGQ9H1L0 117 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 FAM13BQ9NYF5 915 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 SUSD2Q9UGT4 822 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 FNDC3AQ9Y2H6 1198 aaKnown RBP17.3■□□□□ 0.36
SSH1-208ENST00000548522 SLC27A6Q9Y2P4 619 aa17.3■□□□□ 0.36
SSH1-208ENST00000548522 APC2O95996 2303 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 CBFA2T3O75081 653 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 CILPO75339 1184 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 KIF20AO95235 890 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 GNSP15586 552 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 CORO1AP31146 461 aaKnown RBP17.29■□□□□ 0.36
SSH1-208ENST00000548522 TPMTP51580 245 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms