RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DTLQ9NZJ0 730 aa19.21■□□□□ 0.67
PRPF40B-208ENST00000548436 NR2E3Q9Y5X4 410 aa19.21■□□□□ 0.67
PRPF40B-208ENST00000548436 IQANK1A0A1B0GTG1 560 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 FAM155BO75949 473 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 INHBAP08476 426 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 ZFXP17010 805 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 ACAT1P24752 427 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 NR2C2P49116 596 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 PITX1P78337 314 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 EFHC1Q5JVL4 640 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 SH2D5Q6ZV89 423 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 ZNF534Q76KX8 674 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 TBC1D1Q86TI0 1168 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 FAM228AQ86W67 206 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 ALKBH8Q96BT7 664 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 HNRNPABQ99729 332 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 DUSP16Q9BY84 665 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 AP5M1Q9H0R1 490 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 CACNG4Q9UBN1 327 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 ZC3H7BQ9UGR2 993 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 IKBKGQ9Y6K9 419 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 TSC2P49815 1807 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 WDR91A4D1P6 747 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 CXorf49A8MYA2 514 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 TM9SF1O15321 606 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 MT-ND3P03897 115 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 SULT1E1P49888 294 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 SLC25A52Q3SY17 297 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 OTUD1Q5VV17 481 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 MCUQ8NE86 351 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 FAM149B1Q96BN6 582 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 QKIQ96PU8 341 aaKnown RBP eCLIP19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 FZD10Q9ULW2 581 aa19.2■□□□□ 0.66
PRPF40B-208ENST00000548436 MEIS3P2A8K0S8 358 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 CYB561D2O14569 222 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 MGRN1O60291 552 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 LRPAP1P30533 357 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 HOXC8P31273 242 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 MAGEA3P43357 314 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 NDUFV1P49821 464 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 WSCD1Q658N2 575 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 OTOAQ7RTW8 1153 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 VPS52Q8N1B4 723 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 NME8Q8N427 588 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 PPP1R10Q96QC0 940 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 TMPRSS4Q9NRS4 437 aa19.19■□□□□ 0.66
PRPF40B-208ENST00000548436 CFAP73A6NFT4 308 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 PTPN1P18031 435 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 KCNJ2P63252 427 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 PURAQ00577 322 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 CCDC15Q0P6D6 951 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 SEPT7Q16181 437 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 DCAF6Q58WW2 860 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 KIAA0319Q5VV43 1072 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 CST9Q5W186 159 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 C4orf22Q6V702 233 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 TRIM56Q9BRZ2 755 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 LPXNO60711 386 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 DGKIO75912 1065 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 PYGBP11216 843 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 VAV1P15498 845 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 NPR3P17342 541 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 NEK3P51956 506 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 MRPS5P82675 430 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 SLC18A2Q05940 514 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 FSCN1Q16658 493 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 SLC26A11Q86WA9 606 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 MPP5Q8N3R9 675 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 PPM1NQ8N819 430 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 SIGLEC10Q96LC7 697 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 OLFM3Q96PB7 478 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 KATNAL1Q9BW62 490 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 DNAI2Q9GZS0 605 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 SMYD2Q9NRG4 433 aa19.18■□□□□ 0.66
PRPF40B-208ENST00000548436 DAB1O75553 588 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 TPSB2P20231 275 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 PRKCHP24723 683 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 GRIA1P42261 906 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 MNAT1P51948 309 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 TPSAB1Q15661 275 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 ICE2Q659A1 982 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 HEATR6Q6AI08 1181 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 CLEC20AQ6ZU45 233 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 CTAGE3PQ8IX95 158 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 NETO2Q8NC67 525 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 C10orf82Q8WW14 230 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 NT5C3BQ969T7 300 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 MYLK2Q9H1R3 596 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 CD248Q9HCU0 757 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 ALG13Q9NP73 1137 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 CHKBQ9Y259 395 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 Q9Y3F1 56 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 USH1CQ9Y6N9 552 aa19.17■□□□□ 0.66
PRPF40B-208ENST00000548436 SYNJ2BP-COX16A0A087WUM0 186 aa19.16■□□□□ 0.66
PRPF40B-208ENST00000548436 MYADML2A6NDP7 307 aa19.16■□□□□ 0.66
PRPF40B-208ENST00000548436 GABRDO14764 452 aa19.16■□□□□ 0.66
PRPF40B-208ENST00000548436 TOMM70O94826 608 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms