RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 BCLAF3A2AJT9 711 aaKnown RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 DNALI1O14645 258 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 CPB1P15086 417 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 LAG3P18627 525 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 CYP2F1P24903 491 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 HSD17B3P37058 310 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 CXCR3P49682 368 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 KPNA1P52294 538 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 CREMQ03060 361 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 IFFO1Q0D2I5 559 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 NME3Q13232 169 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 TRADDQ15628 312 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 IZUMO3Q5VZ72 239 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 DENND2CQ68D51 928 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 MFSD5Q6N075 450 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 CMTR2Q8IYT2 770 aaKnown RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 PAWRQ96IZ0 340 aaKnown RBP13.95□□□□□ -0.18
PTCH1-215ENST00000547672 TTC25Q96NG3 672 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 EPAS1Q99814 870 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 GPR62Q9BZJ7 368 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 OSBPL2Q9H1P3 480 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 TMLHEQ9NVH6 421 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 PAK5Q9P286 719 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 PRKAG2Q9UGJ0 569 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 SHOC2Q9UQ13 582 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 NAALADL1Q9UQQ1 740 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
PTCH1-215ENST00000547672 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 EIF3HO15372 352 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 MTSS1O43312 755 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 UPP2O95045 317 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 CD48P09326 243 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 IL4RP24394 825 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 IVDP26440 423 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 YWHAQP27348 245 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 OAS2P29728 719 aaKnown RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 CCR1P32246 355 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 PPM1AP35813 382 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 GGCXP38435 758 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ITGA8P53708 1063 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 SLC5A3P53794 718 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 GPS1Q13098 491 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 PDK1Q15118 436 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 P3H1Q32P28 736 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ZC3H12AQ5D1E8 599 aaKnown RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TPGS2Q68CL5 300 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ZDHHC24Q6UX98 284 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ANKS1BQ7Z6G8 1248 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 PCDH19Q8TAB3 1148 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 CSPG4P5Q96PW8 444 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TMEM121Q9BTD3 319 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TXLNGYQ9BZA5 131 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TLR8Q9NR97 1041 aaKnown RBP13.94□□□□□ -0.18
PTCH1-215ENST00000547672 MARCH5Q9NX47 278 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 CLIC5Q9NZA1 410 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 IL37Q9NZH6 218 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 PLAAQ9Y263 795 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 TSC2P49815 1807 aa13.94□□□□□ -0.18
PTCH1-215ENST00000547672 EEF2KO00418 725 aaKnown RBP13.93□□□□□ -0.18
PTCH1-215ENST00000547672 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-215ENST00000547672 TBC1D4O60343 1298 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 B4GALT3O60512 393 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 IFNB1P01574 187 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 FYNP06241 537 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 NUDT17P0C025 328 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 MX2P20592 715 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 SERPINB6P35237 376 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 CDR1P51861 262 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 CACNA2D1P54289 1103 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 ADCY2Q08462 1091 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 PPP2R5DQ14738 602 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 HIBCHQ6NVY1 386 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-215ENST00000547672 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 CNPY4Q8N129 248 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 PDZD8Q8NEN9 1154 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 RTP4Q96DX8 246 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 KCTD15Q96SI1 283 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-215ENST00000547672 TMEM209Q96SK2 561 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 SH3GL2Q99962 352 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 SMOC2Q9H3U7 446 aa13.93□□□□□ -0.18
PTCH1-215ENST00000547672 PPCSQ9HAB8 311 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms