RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ZNF852Q6ZMS4 543 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 ZNF571Q7Z3V5 609 aaPredicted RBP15.11■□□□□ 0.01
DDX54-203ENST00000546869 CPA6Q8N4T0 437 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 OR8K1Q8NGG5 319 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 SLC30A5Q8TAD4 765 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 DQX1Q8TE96 717 aaKnown RBP15.11■□□□□ 0.01
DDX54-203ENST00000546869 CPLX3Q8WVH0 158 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 NT5C3BQ969T7 300 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 PIWIL1Q96J94 861 aaKnown RBP15.11■□□□□ 0.01
DDX54-203ENST00000546869 SERPINB11Q96P15 392 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 IRX2Q9BZI1 471 aaPredicted RBP15.11■□□□□ 0.01
DDX54-203ENST00000546869 EBF3Q9H4W6 596 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 GTSE1Q9NYZ3 720 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 STOML2Q9UJZ1 356 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 TMEM59LQ9UK28 342 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 NAALADL1Q9UQQ1 740 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 WNT6Q9Y6F9 365 aa15.11■□□□□ 0.01
DDX54-203ENST00000546869 KIF26AQ9ULI4 1882 aaPredicted RBP15.11■□□□□ 0.01
DDX54-203ENST00000546869 TECTAO75443 2155 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 KANSL1LA0AUZ9 987 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 OTOL1A6NHN0 477 aaPredicted RBP15.1■□□□□ 0.01
DDX54-203ENST00000546869 DAB1O75553 588 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 KLKB1P03952 638 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 TPM1P09493 284 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 CHKAP35790 457 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 MATKP42679 507 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 CLCN5P51795 746 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 TNK2Q07912 1038 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 TBX2Q13207 712 aaPredicted RBP15.1■□□□□ 0.01
DDX54-203ENST00000546869 TRIM68Q6AZZ1 485 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 RHBDF2Q6PJF5 856 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 UNC45BQ8IWX7 931 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 WBP2Q969T9 261 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 SLC39A13Q96H72 371 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 ADAM22Q9P0K1 906 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 SFMBT1Q9UHJ3 866 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 CA14Q9ULX7 337 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 TLR6Q9Y2C9 796 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 MRPS17Q9Y2R5 130 aaKnown RBP15.1■□□□□ 0.01
DDX54-203ENST00000546869 PIAS3Q9Y6X2 628 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 MYO16Q9Y6X6 1858 aa15.1■□□□□ 0.01
DDX54-203ENST00000546869 SPECC1L-ADORA2AF8WAN1 911 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 SKILP12757 684 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 ARSAP15289 507 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 GBP1P32455 592 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
DDX54-203ENST00000546869 ZNF75DP51815 510 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 CDK17Q00537 523 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 MTA1Q13330 715 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 DHCR24Q15392 516 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 DCAF6Q58WW2 860 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 NUGGCQ68CJ6 796 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 MMS22LQ6ZRQ5 1243 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 MON1BQ7L1V2 547 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 BBS7Q8IWZ6 715 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 ZNF687Q8N1G0 1237 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 CPXM2Q8N436 756 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 EXOC4Q96A65 974 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 PGAP3Q96FM1 320 aaPredicted RBP15.09■□□□□ 0.01
DDX54-203ENST00000546869 SPHK2Q9NRA0 654 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 MARK1Q9P0L2 795 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 AGO1Q9UL18 857 aaKnown RBP15.09■□□□□ 0.01
DDX54-203ENST00000546869 HELZP42694 1942 aaKnown RBP15.09■□□□□ 0.01
DDX54-203ENST00000546869 COL4A2P08572 1712 aa15.09■□□□□ 0.01
DDX54-203ENST00000546869 TCRBV5S1A1TA0A578 114 aa15.08■□□□□ 0
DDX54-203ENST00000546869 DDX3XO00571 662 aaKnown RBP eCLIP15.08■□□□□ 0
DDX54-203ENST00000546869 TRDMT1O14717 391 aaKnown RBP15.08■□□□□ 0
DDX54-203ENST00000546869 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0
DDX54-203ENST00000546869 ADH1CP00326 375 aa15.08■□□□□ 0
DDX54-203ENST00000546869 CYP17A1P05093 508 aa15.08■□□□□ 0
DDX54-203ENST00000546869 IRF1P10914 325 aa15.08■□□□□ 0
DDX54-203ENST00000546869 SLC2A3P11169 496 aa15.08■□□□□ 0
DDX54-203ENST00000546869 AOC1P19801 751 aa15.08■□□□□ 0
DDX54-203ENST00000546869 CORO1AP31146 461 aaKnown RBP15.08■□□□□ 0
DDX54-203ENST00000546869 CTHP32929 405 aa15.08■□□□□ 0
DDX54-203ENST00000546869 GJA4P35212 333 aa15.08■□□□□ 0
DDX54-203ENST00000546869 EIF2DP41214 584 aaKnown RBP15.08■□□□□ 0
DDX54-203ENST00000546869 TBX4P57082 545 aa15.08■□□□□ 0
DDX54-203ENST00000546869 FAM102AQ5T9C2 384 aaPredicted RBP15.08■□□□□ 0
DDX54-203ENST00000546869 TPRG1Q6ZUI0 275 aa15.08■□□□□ 0
DDX54-203ENST00000546869 VPS36Q86VN1 386 aa15.08■□□□□ 0
DDX54-203ENST00000546869 CNGA4Q8IV77 575 aa15.08■□□□□ 0
DDX54-203ENST00000546869 MCOLN2Q8IZK6 566 aa15.08■□□□□ 0
DDX54-203ENST00000546869 C3orf20Q8ND61 904 aa15.08■□□□□ 0
DDX54-203ENST00000546869 FAM3CQ92520 227 aa15.08■□□□□ 0
DDX54-203ENST00000546869 NPY6RQ99463 290 aa15.08■□□□□ 0
DDX54-203ENST00000546869 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0
DDX54-203ENST00000546869 ISCUQ9H1K1 167 aa15.08■□□□□ 0
DDX54-203ENST00000546869 MFSD1Q9H3U5 465 aa15.08■□□□□ 0
DDX54-203ENST00000546869 TBC1D17Q9HA65 648 aa15.08■□□□□ 0
DDX54-203ENST00000546869 SEPT11Q9NVA2 429 aaKnown RBP15.08■□□□□ 0
DDX54-203ENST00000546869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.08■□□□□ 0
DDX54-203ENST00000546869 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.08■□□□□ 0
DDX54-203ENST00000546869 STAP1Q9ULZ2 295 aa15.08■□□□□ 0
DDX54-203ENST00000546869 A0A0A0MRY4 1105 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms