RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM228BP0C875 321 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 EIF4A3P38919 411 aaKnown RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 RNASE9P60153 205 aaKnown RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 MAPK8IP2Q13387 824 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 PDGFRLQ15198 375 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TRIP4Q15650 581 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 EML3Q32P44 896 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 ARCQ7LC44 396 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TAC4Q86UU9 113 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 DNAAF5Q86Y56 855 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 PLD4Q96BZ4 506 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 LINC00597Q9H2U6 94 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 HPS4Q9NQG7 708 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 WNT16Q9UBV4 365 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 SSU72P8A0A1W2PR75 194 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TCRBV5S1A1TA0A578 114 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 SLC9A3R1O14745 358 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 IGLV3-25P01717 112 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 NOS2P35228 1153 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 MATKP42679 507 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 IFNAR2P48551 515 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 KPNA1P52294 538 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 PITX1P78337 314 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 CDK17Q00537 523 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TNK2Q07912 1038 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 SIGLEC14Q08ET2 396 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 NNTQ13423 1086 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 ASTE1Q2TB18 679 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 IER5LQ5T953 404 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 Q6ZNB5 142 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 C3orf20Q8ND61 904 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 ADAM32Q8TC27 787 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 SERPINB11Q96P15 392 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 CHP1Q99653 195 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 ISCUQ9H1K1 167 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 EBF3Q9H4W6 596 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 METTL5Q9NRN9 209 aaKnown RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TBC1D14Q9P2M4 693 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 LSM7Q9UK45 103 aaKnown RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 NENFQ9UMX5 172 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 TRUB2O95900 331 aaKnown RBP21.35■■□□□ 1.01
HMGA2-211ENST00000545998 IGLV3-27P01718 113 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 KLKB1P03952 638 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 ARSAP15289 507 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 RRM1P23921 792 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 FLT3P36888 993 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 EIF4EBP2Q13542 120 aaPredicted RBP21.35■■□□□ 1.01
HMGA2-211ENST00000545998 TRNP1Q6NT89 227 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.35■■□□□ 1.01
HMGA2-211ENST00000545998 BBS7Q8IWZ6 715 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 ATP2A3Q93084 1043 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 DDX23Q9BUQ8 820 aaKnown RBP21.35■■□□□ 1.01
HMGA2-211ENST00000545998 DCLK3Q9C098 648 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 GTSE1Q9NYZ3 720 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 TLR6Q9Y2C9 796 aa21.35■■□□□ 1.01
HMGA2-211ENST00000545998 OTOL1A6NHN0 477 aaPredicted RBP21.34■■□□□ 1.01
HMGA2-211ENST00000545998 CORO1AP31146 461 aaKnown RBP21.34■■□□□ 1.01
HMGA2-211ENST00000545998 RING1Q06587 406 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 TRIM67Q6ZTA4 783 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 ADGRG2Q8IZP9 1017 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 CSGALNACT1Q8TDX6 532 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 NT5C3BQ969T7 300 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 OTUB2Q96DC9 234 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 EPHX3Q9H6B9 360 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 GRPEL1Q9HAV7 217 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 HEBP1Q9NRV9 189 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 RRN3Q9NYV6 651 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 FBXL21Q9UKT6 434 aa21.34■■□□□ 1.01
HMGA2-211ENST00000545998 COL4A3Q01955 1670 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 GOLGA6L3A6NEY3 463 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 SIGLEC16A6NMB1 481 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 IRAK2O43187 625 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 GJB6O95452 261 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 KRT3P12035 628 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 TBX4P57082 545 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 RUNX3Q13761 415 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 SLC18A3Q16572 532 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 SLC44A4Q53GD3 710 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 PPP1R15BQ5SWA1 713 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 OTUD1Q5VV17 481 aaPredicted RBP21.33■■□□□ 1.01
HMGA2-211ENST00000545998 SLC39A13Q96H72 371 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 FCRL2Q96LA5 508 aaPredicted RBP21.33■■□□□ 1.01
HMGA2-211ENST00000545998 PANX2Q96RD6 677 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 NPY6RQ99463 290 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 ADAM33Q9BZ11 813 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 ECT2Q9H8V3 914 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 NHEJ1Q9H9Q4 299 aaPredicted RBP21.33■■□□□ 1.01
HMGA2-211ENST00000545998 IMPACTQ9P2X3 320 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 AGO1Q9UL18 857 aaKnown RBP21.33■■□□□ 1.01
HMGA2-211ENST00000545998 CA14Q9ULX7 337 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 ZNF510Q9Y2H8 683 aa21.33■■□□□ 1.01
HMGA2-211ENST00000545998 KRBA1A5PL33 1030 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 HARS2P49590 506 aaKnown RBP21.32■■□□□ 1
HMGA2-211ENST00000545998 GFPT1Q06210 699 aaPredicted RBP21.32■■□□□ 1
HMGA2-211ENST00000545998 ITPRIPL2Q3MIP1 535 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 SLC25A52Q3SY17 297 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 DNAJC24Q6P3W2 148 aa21.32■■□□□ 1
HMGA2-211ENST00000545998 ALKBH5Q6P6C2 394 aaKnown RBP21.32■■□□□ 1
HMGA2-211ENST00000545998 DENND1CQ8IV53 801 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms