RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 CD1EP15812 388 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 PROZP22891 400 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 CYP2F1P24903 491 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 SLC8A3P57103 927 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 KCNT2Q6UVM3 1135 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 TEX9Q8N6V9 391 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 I3L4J1 428 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 PAPSS1O43252 624 aaPredicted RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 SNRPAP09012 282 aaKnown RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 UBTFL6P0CB48 400 aaPredicted RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 AKAP5P24588 427 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 IGFBP6P24592 240 aaPredicted RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 HMGB2P26583 209 aaKnown RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 SDC4P31431 198 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 STIP1P31948 543 aaKnown RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 SLC25A3Q00325 362 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 RNF220Q5VTB9 566 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 TTC39BQ5VTQ0 682 aaPredicted RBP15.58■□□□□ 0.09
USP28-214ENST00000545540 ATG14Q6ZNE5 492 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 CCDC185Q8N715 623 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 CFAP61Q8NHU2 1237 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 AZIN2Q96A70 460 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 PDZD7Q9H5P4 517 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.09
USP28-214ENST00000545540 GOLGA8TH3BQL2 631 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
USP28-214ENST00000545540 LMO2P25791 158 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 HDAC4P56524 1084 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 THEMIS2Q5TEJ8 643 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 POTEAQ6S8J7 498 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 KBTBD2Q8IY47 623 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
USP28-214ENST00000545540 FAM149B1Q96BN6 582 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 FGD4Q96M96 766 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 ZMAT2Q96NC0 199 aaKnown RBP15.58■□□□□ 0.08
USP28-214ENST00000545540 ARHGEF4Q9NR80 690 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 TUBGCP4Q9UGJ1 667 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 PLLPQ9Y342 182 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 KRT37O76014 449 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 C1QAP02745 245 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 CYP2C8P10632 490 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 GOT1P17174 413 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 ABCD1P33897 745 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 CCNYQ8ND76 341 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 PHC3Q8NDX5 983 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 CXorf38Q8TB03 319 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 ADAM32Q8TC27 787 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 STMN2Q93045 179 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 SNTG2Q9NY99 539 aa15.58■□□□□ 0.08
USP28-214ENST00000545540 ZCCHC18P0CG32 403 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 SLC18A1P54219 525 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 EPHB1P54762 984 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 ENPEPQ07075 957 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 BLMHQ13867 455 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 TAZQ16635 292 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 KHSRPQ92945 711 aaKnown RBP eCLIP15.57■□□□□ 0.08
USP28-214ENST00000545540 NT5C1AQ9BXI3 368 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 UNKQ9C0B0 810 aaKnown RBP15.57■□□□□ 0.08
USP28-214ENST00000545540 MAN1C1Q9NR34 630 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 DDNO94850 711 aaPredicted RBP15.57■□□□□ 0.08
USP28-214ENST00000545540 DHRS4L1P0CG22 281 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 SAT1P21673 171 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 SCN1AP35498 2009 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 MLH1P40692 756 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 SOWAHAQ2M3V2 549 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 ADGRF2Q8IZF7 708 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 FNIP1Q8TF40 1166 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 APOL2Q9BQE5 337 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 KLC2Q9H0B6 622 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 DCLRE1BQ9H816 532 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
USP28-214ENST00000545540 BARX2Q9UMQ3 279 aaPredicted RBP15.57■□□□□ 0.08
USP28-214ENST00000545540 ARHGAP42A6NI28 874 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 PDE5AO76074 875 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 VDRP11473 427 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 TFDP2Q14188 446 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 RALGPS1Q5JS13 557 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 RIOX2Q8IUF8 465 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 AFG1LQ8WV93 481 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 PGBD4Q96DM1 585 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 OXCT2Q9BYC2 517 aaPredicted RBP15.56■□□□□ 0.08
USP28-214ENST00000545540 ZFATQ9P243 1243 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 LRRC42Q9Y546 428 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 KCNK1O00180 336 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 CREB3O43889 395 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 APOEP02649 317 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
USP28-214ENST00000545540 ERVK-10P10266 1014 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 BAG6P46379 1132 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 NUMBP49757 651 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 SLC18A2Q05940 514 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 AP1B1Q10567 949 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 ZNF534Q76KX8 674 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 CMC1Q7Z7K0 106 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 CDHR5Q9HBB8 845 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 PAK5Q9P286 719 aa15.56■□□□□ 0.08
USP28-214ENST00000545540 WDR35Q9P2L0 1181 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms