RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 STON1Q9Y6Q2 735 aa23.8■■□□□ 1.4
CDKN3-207ENST00000543789 CACNA1GO43497 2377 aa23.8■■□□□ 1.4
CDKN3-207ENST00000543789 CALUO43852 315 aaPredicted RBP23.79■■□□□ 1.4
CDKN3-207ENST00000543789 STC2O76061 302 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 F13A1P00488 732 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 RALAP11233 206 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 VAMP7P51809 220 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 STARD3Q14849 445 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 ZNF423Q2M1K9 1284 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 SCD5Q86SK9 330 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 CHCHD4Q8N4Q1 142 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 DNAI2Q9GZS0 605 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 APOBEC3GQ9HC16 384 aaKnown RBP23.79■■□□□ 1.4
CDKN3-207ENST00000543789 CD93Q9NPY3 652 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 RCOR1Q9UKL0 485 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 SLC27A6Q9Y2P4 619 aa23.79■■□□□ 1.4
CDKN3-207ENST00000543789 MYO18AQ92614 2054 aaKnown RBP23.79■■□□□ 1.4
CDKN3-207ENST00000543789 FAM221BA6H8Z2 402 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 CD6P30203 668 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 COG7P83436 770 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 CCDC186Q7Z3E2 898 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 METTL3Q86U44 580 aaKnown RBP23.78■■□□□ 1.4
CDKN3-207ENST00000543789 CDK5RAP1Q96SZ6 601 aaKnown RBP23.78■■□□□ 1.4
CDKN3-207ENST00000543789 DUSP16Q9BY84 665 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 CLIC5Q9NZA1 410 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 USP3Q9Y6I4 520 aa23.78■■□□□ 1.4
CDKN3-207ENST00000543789 IGF2RP11717 2491 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 PCNX2A6NKB5 2137 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 NPC1O15118 1278 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 MAPK13O15264 365 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 SH3BP5O60239 455 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 CILPO75339 1184 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 KIF20AO95235 890 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 KLKB1P03952 638 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 CD58P19256 250 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 MAOBP27338 520 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 CHKAP35790 457 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 GCLMP48507 274 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 ZNF132P52740 706 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 TRIP6Q15654 476 aaKnown RBP23.77■■□□□ 1.4
CDKN3-207ENST00000543789 FUT11Q495W5 492 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 TAS1R2Q8TE23 839 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 P2RY11Q96G91 374 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 TOE1Q96GM8 510 aaKnown RBP23.77■■□□□ 1.4
CDKN3-207ENST00000543789 CAMK1GQ96NX5 476 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 PRDM16Q9HAZ2 1276 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 THAP10Q9P2Z0 257 aaPredicted RBP23.77■■□□□ 1.4
CDKN3-207ENST00000543789 TRAF3IP3Q9Y228 551 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 PCDHB9Q9Y5E1 797 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 CACNA1EQ15878 2313 aa23.77■■□□□ 1.4
CDKN3-207ENST00000543789 GJB3O75712 270 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 PENKP01210 267 aaPredicted RBP23.76■■□□□ 1.39
CDKN3-207ENST00000543789 MFAP3P55082 362 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 FYB2Q5VWT5 728 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 RAB44Q7Z6P3 723 aaPredicted RBP23.76■■□□□ 1.39
CDKN3-207ENST00000543789 CCDC150Q8NCX0 1101 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 UCMAQ8WVF2 138 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 SNX21Q969T3 373 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 DCLK3Q9C098 648 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 ZDHHC5Q9C0B5 715 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 NIF3L1Q9GZT8 377 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 ITM2CQ9NQX7 267 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 WSB2Q9NYS7 404 aaPredicted RBP23.76■■□□□ 1.39
CDKN3-207ENST00000543789 USP25Q9UHP3 1055 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 FAM208BQ5VWN6 2430 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 ZZEF1O43149 2961 aa23.76■■□□□ 1.39
CDKN3-207ENST00000543789 PLXND1Q9Y4D7 1925 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 MYL1P05976 194 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 DNM1Q05193 864 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 GEN1Q17RS7 908 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 PPP1R26Q5T8A7 1209 aaPredicted RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 INTS8Q75QN2 995 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 DNASE2BQ8WZ79 361 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 HEXIM2Q96MH2 286 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 MKRN2Q9H000 416 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 USP36Q9P275 1121 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 RASAL2Q9UJF2 1139 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 NFE2L3Q9Y4A8 694 aa23.75■■□□□ 1.39
CDKN3-207ENST00000543789 TNRC6BQ9UPQ9 1833 aaKnown RBP23.75■■□□□ 1.39
CDKN3-207ENST00000543789 A0A1B0GTW7 788 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 SYNCRIPO60506 623 aaKnown RBP23.74■■□□□ 1.39
CDKN3-207ENST00000543789 HMBSP08397 361 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 TRIM49P0CI25 452 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 TRIM49CP0CI26 452 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 KRT13P13646 458 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 NR2F2P24468 414 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 CORO1AP31146 461 aaKnown RBP23.74■■□□□ 1.39
CDKN3-207ENST00000543789 IL12RB1P42701 662 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 PPP3CAQ08209 521 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 EFEMP1Q12805 493 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 GRIK2Q13002 908 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 ENPP2Q13822 863 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 E2F5Q15329 346 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 NFIL3Q16649 462 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 TMPRSS6Q8IU80 811 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 CADM4Q8NFZ8 388 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 GPR174Q9BXC1 333 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 SPEGQ15772 3267 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 PI4KAP42356 2102 aa23.74■■□□□ 1.39
CDKN3-207ENST00000543789 A0A1B0GVL5 298 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms