RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 KLKB1P03952 638 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 NCAM1P13591 858 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PFKLP17858 780 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 HDCP19113 662 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 NOS2P35228 1153 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 VIPR2P41587 438 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PTPN9P43378 593 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 VAV2P52735 878 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 ZNF143P52747 638 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 SNX16P57768 344 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 EFEMP1Q12805 493 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 DCAF6Q58WW2 860 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 DAB2IPQ5VWQ8 1189 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 REXO1L1PQ8IX06 675 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 ZSCAN18Q8TBC5 510 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 FNIP1Q8TF40 1166 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 FGF14Q92915 247 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PGAP3Q96FM1 320 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 FCRL2Q96LA5 508 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 TBCBQ99426 244 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 SELENOOQ9BVL4 669 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PLA2G2FQ9BZM2 168 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 PIGVQ9NUD9 493 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 NCOR1O75376 2440 aa11.14□□□□□ -0.63
NPIPB3-210ENST00000542817 A0A0A6YYK5 440 aaPredicted RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TRAV19A0A0A6YYK7 116 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 KCNU1A8MYU2 1149 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 ANHXE9PGG2 379 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 IRAK2O43187 625 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 CCP110O43303 1012 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 BMP1P13497 986 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TCF4P15884 667 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TCF3P15923 654 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 PDGFRAP16234 1089 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 GPD1P21695 349 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 CXCR3P49682 368 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 HDAC4P56524 1084 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 SPA17Q15506 151 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TRIP4Q15650 581 aaPredicted RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 ZNF77Q15935 545 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TANGO2Q6ICL3 276 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 PARM1Q6UWI2 310 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 ZNF564Q8TBZ8 553 aaPredicted RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 RFFLQ8WZ73 363 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 PHF7Q9BWX1 381 aaPredicted RBP11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 MAGEB5Q9BZ81 275 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 UVRAGQ9P2Y5 699 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 CPQQ9Y646 472 aa11.13□□□□□ -0.63
NPIPB3-210ENST00000542817 USP27XA6NNY8 438 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 LOC730098B7Z3J9 87 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 LEFTY2O00292 366 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 GFRA2O00451 464 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 STC2O76061 302 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 PTMAP06454 111 aaKnown RBP11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 RALAP11233 206 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 SP100P23497 879 aaPredicted RBP11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 KRT83P78385 493 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 USP4Q13107 963 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 HTR4Q13639 388 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 Q6ZNB5 142 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 NIPA2Q8N8Q9 360 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 SMARCD2Q92925 531 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 MYEOVQ96EZ4 313 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 GCNAQ96QF7 691 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 PEBP4Q96S96 227 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 CNPY3Q9BT09 278 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 TMPRSS4Q9NRS4 437 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 SMPD4Q9NXE4 827 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 THEGQ9P2T0 379 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 XPO7Q9UIA9 1087 aaKnown RBP11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 SCINQ9Y6U3 715 aa11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
NPIPB3-210ENST00000542817 SLC12A8A0AV02 714 aa11.11□□□□□ -0.63
NPIPB3-210ENST00000542817 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
NPIPB3-210ENST00000542817 M0QYT0 321 aa11.11□□□□□ -0.63
NPIPB3-210ENST00000542817 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
NPIPB3-210ENST00000542817 LRCH4O75427 683 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms