RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 DIO1P49895 249 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 DGKQP52824 942 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 COPB1P53618 953 aaKnown RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 TXNL4AP83876 142 aaKnown RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 PSG6Q00889 435 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 RAB30Q15771 203 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 ARHGAP15Q53QZ3 475 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 TMEM63BQ5T3F8 832 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 KIAA1614Q5VZ46 1190 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 ABLIM2Q6H8Q1 611 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 KIRREL2Q6UWL6 708 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 ZNF788Q6ZQV5 615 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 TEX19Q8NA77 164 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 SUN3Q8TAQ9 357 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 CCT6BQ92526 530 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 CTHRC1Q96CG8 243 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 TMEM41AQ96HV5 264 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 HS6ST2Q96MM7 605 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 SNX18Q96RF0 628 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 MMS19Q96T76 1030 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 GDF15Q99988 308 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 MACROD1Q9BQ69 325 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 THAP7Q9BT49 309 aaPredicted RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 TERF2IPQ9NYB0 399 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 UBE2Q2LH0YL09 131 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 H7C1Q1 480 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CLGNO14967 610 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 FFAR2O15552 330 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 PRKCGP05129 697 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 DRD1P21728 446 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 MCM5P33992 734 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 HTR7P34969 479 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 GSTM5P46439 218 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CALD1Q05682 793 aaKnown RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 LMAN2Q12907 356 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 SLC10A2Q12908 348 aaPredicted RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 ATP1A4Q13733 1029 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 TRIM14Q14142 442 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 ACOX1Q15067 660 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 ELF2Q15723 593 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 P3H1Q32P28 736 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CERKLQ49MI3 558 aaPredicted RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 TMEM119Q4V9L6 283 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 RNASE12Q5GAN4 147 aaKnown RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 TMTC4Q5T4D3 741 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 PGBD2Q6P3X8 592 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 GGT6Q6P531 493 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 TLDC1Q6P9B6 456 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 RASGRP3Q8IV61 690 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 PNPLA1Q8N8W4 532 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 FAM71DQ8N9W8 422 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 ZNF527Q8NB42 609 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 TRIM63Q969Q1 353 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 VOPP1Q96AW1 172 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 REPS1Q96D71 796 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CCDC17Q96LX7 622 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 FYTTD1Q96QD9 318 aaKnown RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 EIF3CQ99613 913 aaKnown RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 SENP7Q9BQF6 1050 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 ISCA1Q9BUE6 129 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CINPQ9BW66 212 aaPredicted RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 TTLL2Q9BWV7 592 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 USP29Q9HBJ7 922 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 HELLSQ9NRZ9 838 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 SERGEFQ9UGK8 458 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 CA14Q9ULX7 337 aa3.73□□□□□ -1.81
USP28-210ENST00000542033 COL11A2P13942 1736 aaPredicted RBP3.73□□□□□ -1.81
USP28-210ENST00000542033 GOLGA6L3A6NEY3 463 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 MANSC4A6NHS7 340 aaPredicted RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 LINC01548A6NM66 108 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 PIP5K1BO14986 540 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 CA12O43570 354 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 RBMXL2O75526 392 aaKnown RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 MT-CO3P00414 261 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 CHKAP35790 457 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 IL6STP40189 918 aaPredicted RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 PBX1P40424 430 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 RENBPP51606 427 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 ICA1Q05084 483 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 DEUP1Q05D60 604 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 CCDC15Q0P6D6 951 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 BFSP2Q13515 415 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 PRAMEF17Q5VTA0 474 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 TMEM65Q6PI78 240 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 CCDC174Q6PII3 467 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 BCDIN3DQ7Z5W3 292 aaKnown RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 C12orf76Q8N812 135 aaPredicted RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP28-210ENST00000542033 PNLDC1Q8NA58 520 aaKnown RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 NTN5Q8WTR8 489 aaPredicted RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 C18orf8Q96DM3 657 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 WDR24Q96S15 920 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 PRPF18Q99633 342 aaKnown RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 NUDT22Q9BRQ3 303 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 AGO4Q9HCK5 861 aaKnown RBP3.72□□□□□ -1.81
USP28-210ENST00000542033 PGAP2Q9UHJ9 254 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 ASAP1Q9ULH1 1129 aa3.72□□□□□ -1.81
USP28-210ENST00000542033 A0A087WV62 115 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 PNMA6EA0A0J9YXQ4 647 aa3.71□□□□□ -1.82
USP28-210ENST00000542033 OR2W5A6NFC9 320 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms