RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FAM184AQ8NB25 1140 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 BHLHE22Q8NFJ8 381 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PPP1R14CQ8TAE6 165 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 SLC35G2Q8TBE7 412 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PHOSPHO2Q8TCD6 241 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 TBCKQ8TEA7 893 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 CRYGNQ8WXF5 182 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RIN2Q8WYP3 895 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 C1GALT1C1Q96EU7 318 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RIT2Q99578 217 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 LLPHQ9BRT6 129 aaKnown RBP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 TEKT3Q9BXF9 490 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF302Q9NR11 478 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 NRBP2Q9NSY0 501 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 SETD4Q9NVD3 440 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 KIF3AQ9Y496 699 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RNF114Q9Y508 228 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PCDHA10Q9Y5I2 948 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 UMODL1Q5DID0 1318 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 IGLV3-22A0A075B6J6 115 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 CYP3A7-CYP3A51PA0A087WV96 503 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 A0A0A6YYK5 440 aaPredicted RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 ABHD14A-ACY1A0A1B0GW23 586 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 SH3D21A4FU49 640 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 CCDC154A6NI56 674 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 M0QZ92 97 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 HBP1O60381 514 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 DKC1O60832 514 aaKnown RBP eCLIP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 LY86O95711 162 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 HNRNPLP14866 589 aaKnown RBP eCLIP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 GCFC2P16383 781 aaKnown RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 CYP3A7P24462 503 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 MARK3P27448 753 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 WASP42768 502 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 RAP1GAPP47736 663 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 AFF3P51826 1226 aaKnown RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 JAK3P52333 1124 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 HMGN5P82970 282 aaKnown RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 ITGB3BPQ13352 177 aaPredicted RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 USP10Q14694 798 aaKnown RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF484Q5JVG2 852 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF618Q5T7W0 954 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 THEMIS2Q5TEJ8 643 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 TRIM68Q6AZZ1 485 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 SWSAP1Q6NVH7 229 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 ABHD15Q6UXT9 468 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 FAM43BQ6ZT52 329 aaPredicted RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 NEK8Q86SG6 692 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 RPAINQ86UA6 219 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 NME8Q8N427 588 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 KLHL36Q8N4N3 616 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 RDM1Q8NG50 284 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 SEPT8Q92599 483 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 APBB2Q92870 758 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 HPS3Q969F9 1004 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 MVB12AQ96EY5 273 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 AJUBAQ96IF1 538 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 LCORQ96JN0 433 aaPredicted RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 FAM167AQ96KS9 214 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 FAM20AQ96MK3 541 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 FDXACB1Q9BRP7 624 aaPredicted RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 SOX7Q9BT81 388 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 KMT5AQ9NQR1 393 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 DDX25Q9UHL0 483 aaKnown RBP5.97□□□□□ -1.45
CPSF7-220ENST00000541963 KCNJ14Q9UNX9 436 aa5.97□□□□□ -1.45
CPSF7-220ENST00000541963 IGKV6D-21A0A0A0MT36 114 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 A0A1W2PR48 441 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 TBX3O15119 743 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 MSH4O15457 936 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 MAGEB2O15479 319 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 HTRA2O43464 458 aaPredicted RBP5.96□□□□□ -1.46
CPSF7-220ENST00000541963 CCNT1O60563 726 aaKnown RBP5.96□□□□□ -1.46
CPSF7-220ENST00000541963 ENDOD1O94919 500 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 CTDNEP1O95476 244 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 CXCL10P02778 98 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 AMHP03971 560 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 C1QTNF9P0C862 333 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 INSRRP14616 1297 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 CTSSP25774 331 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 TMOD1P28289 359 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 ECHS1P30084 290 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 HOXC8P31273 242 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 MRE11P49959 708 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 ADAM17P78536 824 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 MGAT2Q10469 447 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 PCOLCEQ15113 449 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 PLCB4Q15147 1175 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 TRIM71Q2Q1W2 868 aaKnown RBP5.96□□□□□ -1.46
CPSF7-220ENST00000541963 LETM2Q2VYF4 491 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 PGS1Q32NB8 556 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 C19orf54Q5BKX5 351 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 FAM26FQ5R3K3 315 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 ATAT1Q5SQI0 421 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 LRCH2Q5VUJ6 765 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 KRT40Q6A162 431 aa5.96□□□□□ -1.46
CPSF7-220ENST00000541963 LILRA6Q6PI73 481 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms