RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 EFEMP1Q12805 493 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 LRMPQ12912 555 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 ENPP2Q13822 863 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 DCAF17Q5H9S7 520 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 N4BP2L1Q5TBK1 243 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TCERG1LQ5VWI1 586 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 FOXR2Q6PJQ5 311 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TMEFF1Q8IYR6 380 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC35F5Q8WV83 523 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 KAT5Q92993 513 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 PIWIL1Q96J94 861 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TSG101Q99816 390 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 LSM7Q9UK45 103 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 ACACBO00763 2458 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 GOLGA6L4A6NEF3 574 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 C4orf47A7E2U8 309 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 E7ENQ6 273 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 ZBED1O96006 694 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 CALCAP01258 141 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 VDRP11473 427 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 CORO1AP31146 461 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 DGKGP49619 791 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 MFAP3P55082 362 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 MORC3Q14149 939 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 GOLGA7BQ2TAP0 167 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 PEAR1Q5VY43 1037 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 TMEM215Q68D42 235 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 SCML4Q8N228 414 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 IPO4Q8TEX9 1081 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 BHMTQ93088 406 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 CEP63Q96MT8 703 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 CD93Q9NPY3 652 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 PILRBQ9UKJ0 227 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 KIAA1257Q9ULG3 409 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 ZNF510Q9Y2H8 683 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 PI4KAP42356 2102 aa12.38□□□□□ -0.43
CLSTN3-211ENST00000541667 IGHV1OR15-9A0A0B4J2B8 117 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC12A8A0AV02 714 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 KCNK5O95279 499 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 HMBSP08397 361 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 HOXB2P14652 356 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 NDUFV2P19404 249 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 ZNF132P52740 706 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 BECN1Q14457 450 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 CNGA2Q16280 664 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 SGO2Q562F6 1265 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 RNF43Q68DV7 783 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 IL31Q6EBC2 164 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 TRMT11Q7Z4G4 463 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 TRIM59Q8IWR1 403 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 ARHGAP18Q8N392 663 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 PIGKQ92643 395 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 MED15Q96RN5 788 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 CDK5RAP1Q96SZ6 601 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 DCLK3Q9C098 648 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC6A17Q9H1V8 727 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 METTL14Q9HCE5 456 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 THAP10Q9P2Z0 257 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 EVLQ9UI08 416 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 ASCC3Q8N3C0 2202 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-211ENST00000541667 EPG5Q9HCE0 2579 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 PCNX2A6NKB5 2137 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 PSMA7O14818 248 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 GIPC1O14908 333 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 KHNYNO15037 678 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 FYNP06241 537 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 PAEPP09466 180 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 ITPKAP23677 461 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 TBXAS1P24557 533 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms