RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CRISPLD1Q9H336 500 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 LMCD1Q9NZU5 365 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 CALCOCO1Q9P1Z2 691 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 STIM2Q9P246 746 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 AFF4Q9UHB7 1163 aaKnown RBP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 ZNF487B1APH4 448 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 M0QYT0 321 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 C2CD2LO14523 706 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ABLIM3O94929 683 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 F9P00740 461 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 RPL17P18621 184 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 TUFMP49411 452 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ATXN1P54253 815 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 AIF1P55008 147 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 CDH6P55285 790 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 YWHAGP61981 247 aaKnown RBP eCLIP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 PITX1P78337 314 aaPredicted RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 CREMQ03060 361 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 KRT17Q04695 432 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DUSP4Q13115 394 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DHX34Q14147 1143 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 BRD3Q15059 726 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 AAK1Q2M2I8 961 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 TPGS2Q68CL5 300 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DENND5BQ6ZUT9 1274 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 VPS52Q8N1B4 723 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ARHGAP18Q8N392 663 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ZNF461Q8TAF7 563 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SLC7A14Q8TBB6 771 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 MAGOHBQ96A72 148 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SEPT5Q99719 369 aaPredicted RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 HEMGNQ9BXL5 484 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ABCC13Q9NSE7 274 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 FNIP2Q9P278 1114 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 PCYOX1Q9UHG3 505 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SSX2IPQ9Y2D8 614 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SLC27A5Q9Y2P5 690 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 MYO7AQ13402 2215 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ATG2AQ2TAZ0 1938 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 FGF18O76093 207 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 CD48P09326 243 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 KRT10P13645 584 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 IFRD2Q12894 506 aaPredicted RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 RAB33AQ14088 237 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DPYSL3Q14195 570 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 KRT81Q14533 505 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 LLGL1Q15334 1064 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 CCNG2Q16589 344 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SDHAF4Q5VUM1 108 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 BTBD8Q5XKL5 378 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 SCD5Q86SK9 330 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 MON1AQ86VX9 555 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 HDAC7Q8WUI4 952 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 HLA-CQ95604 372 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 NTAN1Q96AB6 310 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DCLK3Q9C098 648 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 ZBP1Q9H171 429 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 WDR6Q9NNW5 1121 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 MRPL17Q9NRX2 175 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 PIGVQ9NUD9 493 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 TMEM51Q9NW97 253 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 AMACRQ9UHK6 382 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 AP4E1Q9UPM8 1137 aa14.82□□□□□ -0.04
CYB561A3-216ENST00000540755 CCDC151A5D8V7 595 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 FAM187AA6NFU0 413 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 LILRB3O75022 631 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 ERLIN1O75477 346 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 HEXIM1O94992 359 aaKnown RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 IGLV3-25P01717 112 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 CTSAP10619 480 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 ATF2P15336 505 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 YWHAQP27348 245 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 TNFRSF8P28908 595 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 COILP38432 576 aaPredicted RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 VSNL1P62760 191 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 ADCY2Q08462 1091 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 KAZNQ674X7 775 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 DRICH1Q6PGQ1 229 aaPredicted RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 FBXO38Q6PIJ6 1188 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 CCDC137Q6PK04 289 aaKnown RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 BBS12Q6ZW61 710 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 FAM131BQ86XD5 332 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 CCDC185Q8N715 623 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 HNRNPLLQ8WVV9 542 aaKnown RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 EDEM1Q92611 657 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 SLCO2A1Q92959 643 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 ZNF670Q9BS34 389 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 FRMD8P1Q9BZ68 369 aaPredicted RBP14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 RXFP1Q9HBX9 757 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 PCDH18Q9HCL0 1135 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 FZD10Q9ULW2 581 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 MAFFQ9ULX9 164 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 RWDD3Q9Y3V2 267 aa14.81□□□□□ -0.04
CYB561A3-216ENST00000540755 BHMG1C9JSJ3 638 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms