RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 CDH9Q9ULB4 789 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 PRG3Q9Y2Y8 225 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 APOL1O14791 398 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 XPO1O14980 1071 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 HSPA1AP0DMV8 641 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 HSPA1BP0DMV9 641 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 IL4RP24394 825 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 RABGGTBP53611 331 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 PDIA2Q13087 525 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 EFHC1Q5JVL4 640 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ZBED8Q8IZ13 594 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 PLD5Q8N7P1 536 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 NAT8LQ8N9F0 302 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 OR10T2Q8NGX3 314 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 CENPIQ92674 756 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ZNF670Q9BS34 389 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 C11orf84Q9BUA3 381 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 CTNNAL1Q9UBT7 734 aa21.05■□□□□ 0.96
PACSIN3-211ENST00000539589 ZNF487B1APH4 448 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 TMEM189-UBE2V1I3L0A0 370 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PARNO95453 639 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 CLTBP09497 229 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 CACNA2D1P54289 1103 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ARL4CP56559 192 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 C1orf228Q6PIY5 440 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 CLEC20AQ6ZU45 233 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PIGZQ86VD9 579 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ZC3H18Q86VM9 953 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ATXN2LQ8WWM7 1075 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PKMYT1Q99640 499 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 LRFN2Q9ULH4 789 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 NAALADL1Q9UQQ1 740 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 LTBP2Q14767 1821 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 EXOC1LA0A1B0GW35 172 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 GOLGA8MH3BSY2 632 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 H7C0C1 242 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 NPR3P17342 541 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PAX3P23760 479 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ATP5OP48047 213 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 BCAR1P56945 870 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 FASTKD3Q14CZ7 662 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 MICALCLQ6ZW33 695 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ABI1Q8IZP0 508 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 CHMP6Q96FZ7 201 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 ACBD6Q9BR61 282 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 TMLHEQ9NVH6 421 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PCDHB8Q9UN66 801 aa21.04■□□□□ 0.96
PACSIN3-211ENST00000539589 PCSK1P29120 753 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 CA9Q16790 459 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 SLC9A4Q6AI14 798 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM171BQ6P995 826 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM35AQ86V20 835 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 LRRTM3Q86VH5 581 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 METTL23Q86XA0 190 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 NPAS4Q8IUM7 802 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 PQLC3Q8N755 202 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM193BQ96PV7 902 aaPredicted RBP21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 MED10Q9BTT4 135 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 RHOBTB2Q9BYZ6 727 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 VPS37BQ9H9H4 285 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 DSEQ9UL01 958 aa21.03■□□□□ 0.96
PACSIN3-211ENST00000539589 NRP1O14786 923 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TFE3P19532 575 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TYMPP19971 482 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 PPP6R3Q5H9R7 873 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 INTS6LQ5JSJ4 861 aaKnown RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 HP1BP3Q5SSJ5 553 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 ANKRD22Q5VYY1 191 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 OVOS1Q6IE37 1185 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM43BQ6ZT52 329 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 ZMIZ2Q8NF64 920 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 PCDH19Q8TAB3 1148 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 FAF2Q96CS3 445 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 SMOQ99835 787 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 KRT82Q9NSB4 513 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TBK1Q9UHD2 729 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 GGA2Q9UJY4 613 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 COL4A6Q14031 1691 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 CFAP69A5D8W1 941 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TRIM43BA6NCK2 446 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 MAP3K7CLP57077 242 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 BASP1P80723 227 aaKnown RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 DPYSL2Q16555 572 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 CPLX4Q7Z7G2 160 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 MYLPFQ96A32 169 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 TRIM43Q96BQ3 446 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 CCDC134Q9H6E4 229 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 PPCSQ9HAB8 311 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 HEY1Q9Y5J3 304 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 FAM169AQ9Y6X4 670 aa21.02■□□□□ 0.96
PACSIN3-211ENST00000539589 L1CAMP32004 1257 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 MATKP42679 507 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 STRADAQ7RTN6 431 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 TDRPQ86YL5 185 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 CYP4X1Q8N118 509 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 PDIK1LQ8N165 341 aa21.01■□□□□ 0.95
PACSIN3-211ENST00000539589 NDRG1Q92597 394 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms