RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 A0A0U1RQJ8 604 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 OTOL1A6NHN0 477 aaPredicted RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 C2CD4BA6NLJ0 364 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 HSF2BPO75031 334 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 STC2O76061 302 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 GLI1P08151 1106 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 MBL2P11226 248 aaPredicted RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 NCAM1P13591 858 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ATP5C1P36542 298 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ATXN1P54253 815 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 GALCP54803 685 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 KRT83P78385 493 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 MAMLD1Q13495 774 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 EFHC1Q5JVL4 640 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 C10orf120Q5SQS8 335 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 BTBD8Q5XKL5 378 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ALKBH5Q6P6C2 394 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 Q6ZNB5 142 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 MIB1Q86YT6 1006 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ZDHHC17Q8IUH5 632 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ARHGAP18Q8N392 663 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 C3orf20Q8ND61 904 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 IPO4Q8TEX9 1081 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 FAM149B1Q96BN6 582 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 VCPIP1Q96JH7 1222 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 FCRL2Q96LA5 508 aaPredicted RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
CCDC42-202ENST00000539522 RASAL2Q9UJF2 1139 aa13.57□□□□□ -0.24
CCDC42-202ENST00000539522 MYOFQ9NZM1 2061 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 RCCD1A6NED2 376 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 EIF3CLB5ME19 914 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 NDUFA10O95299 355 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CALB1P05937 261 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CCDC175P0C221 793 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 AVPR1AP37288 418 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 MATKP42679 507 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 SPA17Q15506 151 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 TRIP4Q15650 581 aaPredicted RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 GAB4Q2WGN9 574 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CCDC14Q49A88 953 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CCDC122Q5T0U0 273 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 TRIM68Q6AZZ1 485 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 ARCQ7LC44 396 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CPNE8Q86YQ8 564 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 GJD3Q8N144 294 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CELF5Q8N6W0 485 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 MYEOVQ96EZ4 313 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CFAP57Q96MR6 1250 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 EIF3CQ99613 913 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 LINC00597Q9H2U6 94 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 ZFP14Q9HCL3 533 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 HPS4Q9NQG7 708 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 OBP2AQ9NY56 170 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 MARCH2Q9P0N8 246 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 CFAP97Q9P2B7 532 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 XPO7Q9UIA9 1087 aaKnown RBP13.56□□□□□ -0.24
CCDC42-202ENST00000539522 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 DNMT3LQ9UJW3 386 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
CCDC42-202ENST00000539522 KIAA1549LQ6ZVL6 1849 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 GFRA2O00451 464 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 IRAK2O43187 625 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
CCDC42-202ENST00000539522 AKR1B10O60218 316 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 ENDOD1O94919 500 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 TRUB2O95900 331 aaKnown RBP13.55□□□□□ -0.24
CCDC42-202ENST00000539522 CYP1A2P05177 515 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 RALAP11233 206 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 ABCB4P21439 1286 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 GPC5P78333 572 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 TNK2Q07912 1038 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 C15orf59Q2T9L4 293 aaPredicted RBP13.55□□□□□ -0.24
CCDC42-202ENST00000539522 TOGARAM2Q6ZUX3 1019 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 MTSS1LQ765P7 747 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 VPS36Q86VN1 386 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 BBS7Q8IWZ6 715 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 RXFP2Q8WXD0 754 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
CCDC42-202ENST00000539522 TBCBQ99426 244 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 PIGVQ9NUD9 493 aa13.55□□□□□ -0.24
CCDC42-202ENST00000539522 IGSF9Q9P2J2 1179 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms