RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 SMOC2Q9H3U7 446 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 FAM204AQ9H8W3 233 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 TRPC7Q9HCX4 862 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLPB-210ENST00000539148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLPB-210ENST00000539148 DONSONQ9NYP3 566 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 MARCH2Q9P0N8 246 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
CLPB-210ENST00000539148 LSM7Q9UK45 103 aaKnown RBP10.67□□□□□ -0.7
CLPB-210ENST00000539148 ZNF510Q9Y2H8 683 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
CLPB-210ENST00000539148 A0A1W2PRU2 124 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 MACROD2A1Z1Q3 448 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 C2CD4BA6NLJ0 364 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 MIF4GDA9UHW6 222 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 M0QYT0 321 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 SLC9A3R1O14745 358 aaPredicted RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 SPOPO43791 374 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 PRPSAP2O60256 369 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 GLP2RO95838 553 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 KRT7P08729 469 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 CCR1P32246 355 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 RDXP35241 583 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 PCK1P35558 622 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 SSR1P43307 286 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 SULT1E1P49888 294 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 ZNF135P52742 658 aaPredicted RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 CBX2Q14781 532 aaPredicted RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 C2CD6Q53TS8 623 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 PPP1R15BQ5SWA1 713 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 GPR158Q5T848 1215 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 SYCE2Q6PIF2 218 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 TMC8Q8IU68 726 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 PSTKQ8IV42 348 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 ATP6V0D2Q8N8Y2 350 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 RXFP2Q8WXD0 754 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 EDEM1Q92611 657 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 PLD4Q96BZ4 506 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 CARD6Q9BX69 1037 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 PACSIN1Q9BY11 444 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 UBE2ZQ9H832 354 aaPredicted RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 DDIT4Q9NX09 232 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 TLR6Q9Y2C9 796 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 REXO2Q9Y3B8 237 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 NR2E1Q9Y466 385 aa10.66□□□□□ -0.7
CLPB-210ENST00000539148 SPTBN5Q9NRC6 3674 aaKnown RBP10.66□□□□□ -0.7
CLPB-210ENST00000539148 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TARSL2A2RTX5 802 aaKnown RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 LINC01565O15544 149 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 GRAP2O75791 330 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 PROSCO94903 275 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 LATS1O95835 1130 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TRUB2O95900 331 aaKnown RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 MBL2P11226 248 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 PAFAH1B1P43034 410 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 SLC11A2P49281 568 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TBX4P57082 545 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 FAM193AP78312 1265 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 SLC7A9P82251 487 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 EFEMP1Q12805 493 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 MESDQ14696 234 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 PPP2R5DQ14738 602 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TRIP4Q15650 581 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 BOLA3Q53S33 107 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TMCO3Q6UWJ1 677 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 GAREM2Q75VX8 874 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 MTSS1LQ765P7 747 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 PEX26Q7Z412 305 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 SCD5Q86SK9 330 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 UBL4BQ8N7F7 174 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 C12orf76Q8N812 135 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 DQX1Q8TE96 717 aaKnown RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 CLEC4CQ8WTT0 213 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 MSLNLQ96KJ4 702 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TBCBQ99426 244 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 NPY6RQ99463 290 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 LRRC3Q9BY71 257 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 WDCPQ9H6R7 721 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 NMUR1Q9HB89 426 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 ZNF334Q9HCZ1 680 aaPredicted RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 THG1LQ9NWX6 298 aaKnown RBP10.65□□□□□ -0.7
CLPB-210ENST00000539148 OBP2AQ9NY56 170 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TBC1D14Q9P2M4 693 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 TJP2Q9UDY2 1190 aa10.65□□□□□ -0.7
CLPB-210ENST00000539148 RASAL2Q9UJF2 1139 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms