RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 SEMA4DQ92854 862 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 GATA6Q92908 595 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 FAXDC2Q96IV6 333 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-206ENST00000538970 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 GCN1Q92616 2671 aaKnown RBP13.16□□□□□ -0.3
VAMP1-206ENST00000538970 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 LOC400499M0QZD8 3231 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 DMXL2Q8TDJ6 3036 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 IGHV1OR15-9A0A0B4J2B8 117 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ZNF202O95125 648 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ENGP17813 658 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 NDUFV2P19404 249 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ITPKAP23677 461 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 HOXD12P35452 270 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ZNF252P-AS1Q0IIN9 211 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 KIAA1211LQ6NV74 962 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 SLC23A3Q6PIS1 610 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 SLC36A4Q6YBV0 504 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 SLC4A11Q8NBS3 891 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 IPO4Q8TEX9 1081 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 CDK5RAP1Q96SZ6 601 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ARID3AQ99856 593 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 RASAL2Q9UJF2 1139 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 ITPR1Q14643 2758 aa13.15□□□□□ -0.3
VAMP1-206ENST00000538970 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
VAMP1-206ENST00000538970 PENKP01210 267 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-206ENST00000538970 KLKB1P03952 638 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 RALAP11233 206 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 CEACAM1P13688 526 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 MAPK8P45983 427 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 RAD23BP54727 409 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 UAP1L1Q3KQV9 507 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 ARHGAP17Q68EM7 881 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 BHMTQ93088 406 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 ERLEC1Q96DZ1 483 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 TMEM176AQ96HP8 235 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
VAMP1-206ENST00000538970 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 FAM124BQ9H5Z6 455 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-206ENST00000538970 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 CACNA2D2Q9NY47 1150 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 FBXO10Q9UK96 956 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 RAD54BQ9Y620 910 aa13.14□□□□□ -0.31
VAMP1-206ENST00000538970 TAF4O00268 1085 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 GFRA2O00451 464 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 STX10O60499 249 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF217O75362 1048 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
VAMP1-206ENST00000538970 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
VAMP1-206ENST00000538970 MFAP3P55082 362 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 COG7P83436 770 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF33AQ06730 810 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 EFEMP1Q12805 493 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 ARHGAP18Q8N392 663 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 DEFB124Q8NES8 71 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 ZCCHC14Q8WYQ9 949 aaKnown RBP13.13□□□□□ -0.31
VAMP1-206ENST00000538970 MRGPRX1Q96LB2 322 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 SLC27A6Q9Y2P4 619 aa13.13□□□□□ -0.31
VAMP1-206ENST00000538970 CETN3O15182 167 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 ZBTB24O43167 697 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CFIP05156 583 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 HMBSP08397 361 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SERPINF2P08697 491 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CHKAP35790 457 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 YWHAGP61981 247 aaKnown RBP eCLIP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 PNOCQ13519 176 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 GEN1Q17RS7 908 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 DUOXA1Q1HG43 343 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms