RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SLC39A13Q96H72 371 aa14.34□□□□□ -0.11
CD9-208ENST00000538834 PIWIL1Q96J94 861 aaKnown RBP14.34□□□□□ -0.11
CD9-208ENST00000538834 NAP1L5Q96NT1 182 aaPredicted RBP14.34□□□□□ -0.11
CD9-208ENST00000538834 P2RY13Q9BPV8 354 aa14.34□□□□□ -0.11
CD9-208ENST00000538834 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
CD9-208ENST00000538834 ZNF510Q9Y2H8 683 aa14.34□□□□□ -0.11
CD9-208ENST00000538834 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
CD9-208ENST00000538834 MUC22E2RYF6 1773 aaPredicted RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 H0Y858 1186 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 K7EQS6 105 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 SCAMP3O14828 347 aaKnown RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 LATS1O95835 1130 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 EGFP01133 1207 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 PENKP01210 267 aaPredicted RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 CYP1A1P04798 512 aaPredicted RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 SP9P0CG40 484 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 HOXA6P31267 233 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 SOX5P35711 763 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 PLA2G5P39877 138 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 USP8P40818 1118 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 POLR2FP61218 127 aaKnown RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 UBXN1Q04323 297 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 EFEMP1Q12805 493 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 RAPGEF1Q13905 1077 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 LRRC32Q14392 662 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 FBXO43Q4G163 708 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 ZNF397Q8NF99 534 aaPredicted RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 BAP1Q92560 729 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 EDEM1Q92611 657 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 FAM207AQ9NSI2 230 aaPredicted RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
CD9-208ENST00000538834 ZNF292O60281 2723 aa14.33□□□□□ -0.12
CD9-208ENST00000538834 K7ESF4 209 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 PIK3R2O00459 728 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 CACNG3O60359 315 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 LILRB5O75023 590 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 ADH1CP00326 375 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 TPM2P07951 284 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 CISD3P0C7P0 127 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 IRF1P10914 325 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 ADH5P11766 374 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
CD9-208ENST00000538834 SCNN1AP37088 669 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 SLC6A11P48066 632 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 NOMO3P69849 1222 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 FMO1Q01740 532 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 GAD2Q05329 585 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 FYB2Q5VWT5 728 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 SYPL2Q5VXT5 272 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 Q6ZS52 159 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 SLC26A9Q7LBE3 791 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 MIB1Q86YT6 1006 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 FMNL3Q8IVF7 1028 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 NT5C3BQ969T7 300 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 PPP1R13BQ96KQ4 1090 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 IRX2Q9BZI1 471 aaPredicted RBP14.32□□□□□ -0.12
CD9-208ENST00000538834 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 HCN2Q9UL51 889 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 MYO6Q9UM54 1294 aa14.32□□□□□ -0.12
CD9-208ENST00000538834 NUP205Q92621 2012 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 SLC12A8A0AV02 714 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 ANTXRLA6NF34 631 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 PES1O00541 588 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 LSM8O95777 96 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 ERBB2P04626 1255 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 KRT9P35527 623 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 KIR2DL1P43626 348 aaPredicted RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 YWHAZP63104 245 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 GRSF1Q12849 480 aaKnown RBP eCLIP14.31□□□□□ -0.12
CD9-208ENST00000538834 TAF5Q15542 800 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 FIGNQ5HY92 759 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 ARCQ7LC44 396 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 BNIPLQ7Z465 357 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 IRF2BP2Q7Z5L9 587 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 LUZP1Q86V48 1076 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 ABCA7Q8IZY2 2146 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 C1orf131Q8NDD1 294 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 DQX1Q8TE96 717 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 FCRL2Q96LA5 508 aaPredicted RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 NACA2Q9H009 215 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 MIS12Q9H081 205 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 NLRC4Q9NPP4 1024 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 LSM7Q9UK45 103 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms