RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TMEM209Q96SK2 561 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 SLC9A7Q96T83 725 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 MAGEB5Q9BZ81 275 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 ELAC1Q9H777 363 aaKnown RBP21.18■□□□□ 0.98
DDX55-205ENST00000538744 USP29Q9HBJ7 922 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 COX16Q9P0S2 106 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 USP3Q9Y6I4 520 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 ERICH4A6NGS2 130 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 DCDC2CA8MYV0 355 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 H3BRJ5 948 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 KCNN4O15554 427 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 NBNO60934 754 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 SLCO1A2P46721 670 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 OR1G1P47890 313 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 XRCC4Q13426 336 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 HIF1AQ16665 826 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 EFHC2Q5JST6 749 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 C4orf50Q6ZRC1 276 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 FAM43BQ6ZT52 329 aaPredicted RBP21.18■□□□□ 0.98
DDX55-205ENST00000538744 PYROXD2Q8N2H3 581 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 PIGVQ9NUD9 493 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 PAK5Q9P286 719 aa21.18■□□□□ 0.98
DDX55-205ENST00000538744 COL4A4P53420 1690 aaPredicted RBP21.17■□□□□ 0.98
DDX55-205ENST00000538744 TRAPPC3O43617 180 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 TCEA3O75764 348 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 IVLP07476 585 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 NCAM1P13591 858 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 GOT1P17174 413 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 ARL4CP56559 192 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 HTRA3P83110 453 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 AUHQ13825 339 aaKnown RBP21.17■□□□□ 0.98
DDX55-205ENST00000538744 LONRF1Q17RB8 773 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 PLEKHG4Q58EX7 1191 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 ANKRD22Q5VYY1 191 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 PM20D1Q6GTS8 502 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 B4GALNT4Q76KP1 1039 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 BHLHA9Q7RTU4 235 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 SPATA2LQ8IUW3 424 aaPredicted RBP21.17■□□□□ 0.98
DDX55-205ENST00000538744 NTAN1Q96AB6 310 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 PGAP3Q96FM1 320 aaPredicted RBP21.17■□□□□ 0.98
DDX55-205ENST00000538744 CCDC77Q9BR77 488 aa21.17■□□□□ 0.98
DDX55-205ENST00000538744 PITPNM1O00562 1244 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 ALOX15BO15296 676 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 RBL1P28749 1068 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 MDH1P40925 334 aaKnown RBP21.16■□□□□ 0.98
DDX55-205ENST00000538744 BASP1P80723 227 aaKnown RBP21.16■□□□□ 0.98
DDX55-205ENST00000538744 STAT4Q14765 748 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 ABI1Q8IZP0 508 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 DBF4BQ8NFT6 615 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 RNF139Q8WU17 664 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 TRIM62Q9BVG3 475 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 PCDHB7Q9Y5E2 793 aa21.16■□□□□ 0.98
DDX55-205ENST00000538744 A0A087WUV0 522 aaPredicted RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 GOLGA8MH3BSY2 632 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 ENPP3O14638 875 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 EIF3HO15372 352 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX55-205ENST00000538744 AMPD1P23109 780 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 GBE1Q04446 702 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 PDIA2Q13087 525 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 SLC45A4Q5BKX6 768 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 TNFAIP8L3Q5GJ75 292 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 NCBP2-AS2Q69YL0 99 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 TTC19Q6DKK2 380 aaPredicted RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 C4orf22Q6V702 233 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 BZW1Q7L1Q6 419 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 SEPT8Q92599 483 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 CNOT10Q9H9A5 744 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 PAK6Q9NQU5 681 aaPredicted RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 DNAJB4Q9UDY4 337 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 SLC12A6Q9UHW9 1150 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 PRG3Q9Y2Y8 225 aaPredicted RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 TANC1Q9C0D5 1861 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 ZNF638Q14966 1978 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 MAP3K6O95382 1288 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 F9P00740 461 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 ADRA1BP35368 520 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 NRLP54845 237 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 GUCY1A3Q02108 690 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 SCAPQ12770 1279 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 GPNMBQ14956 572 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 CTU1Q7Z7A3 348 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 ZBED8Q8IZ13 594 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 TAB3Q8N5C8 712 aaPredicted RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 APBB2Q92870 758 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 QKIQ96PU8 341 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX55-205ENST00000538744 WDR6Q9NNW5 1121 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 ARHGEF4Q9NR80 690 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 DDIT4Q9NX09 232 aa21.15■□□□□ 0.98
DDX55-205ENST00000538744 XPO7Q9UIA9 1087 aaKnown RBP21.15■□□□□ 0.98
DDX55-205ENST00000538744 OAZ2O95190 189 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 ATP5DP30049 168 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 IFI35P80217 286 aaPredicted RBP21.14■□□□□ 0.97
DDX55-205ENST00000538744 SLC10A2Q12908 348 aaPredicted RBP21.14■□□□□ 0.97
DDX55-205ENST00000538744 FASTKD3Q14CZ7 662 aaKnown RBP21.14■□□□□ 0.97
DDX55-205ENST00000538744 LRRC31Q6UY01 552 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 DCP1BQ8IZD4 617 aaKnown RBP21.14■□□□□ 0.97
DDX55-205ENST00000538744 ADAM32Q8TC27 787 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 DEFB118Q96PH6 123 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 ZCWPW1Q9H0M4 648 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 TMPRSS4Q9NRS4 437 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms