RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TRIP4Q15650 581 aaPredicted RBP13.67□□□□□ -0.22
CHFR-216ENST00000538235 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
CHFR-216ENST00000538235 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
CHFR-216ENST00000538235 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 NADSYN1Q6IA69 706 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 TRIM72Q6ZMU5 477 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 TRIM67Q6ZTA4 783 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
CHFR-216ENST00000538235 OSCP1Q8WVF1 389 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 ZMYM5Q9UJ78 669 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 DNMT3LQ9UJW3 386 aa13.67□□□□□ -0.22
CHFR-216ENST00000538235 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
CHFR-216ENST00000538235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHFR-216ENST00000538235 EML5Q05BV3 1969 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 DLL1O00548 723 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 SERPING1P05155 500 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
CHFR-216ENST00000538235 RALAP11233 206 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
CHFR-216ENST00000538235 SIGLEC14Q08ET2 396 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 TMEM139Q8IV31 216 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 ARHGEF26Q96DR7 871 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 TBCBQ99426 244 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 NPY6RQ99463 290 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 BRD9Q9H8M2 597 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 POPDC2Q9HBU9 364 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
CHFR-216ENST00000538235 ARHGEF3Q9NR81 526 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 ADAMTS1Q9UHI8 967 aa13.66□□□□□ -0.22
CHFR-216ENST00000538235 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
CHFR-216ENST00000538235 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 TMEM221A6NGB7 291 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 M0R296 226 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 DPYSL4O14531 572 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 TRIM24O15164 1050 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 HSF2BPO75031 334 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 TPM3P06753 285 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 FECHP22830 423 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 SLC6A4P31645 630 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 SCNN1AP37088 669 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 GGCXP38435 758 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 OPRD1P41143 372 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 IRAK1P51617 712 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 FZD5Q13467 585 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 TRIM14Q14142 442 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 HTR3DQ70Z44 454 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 UBALD2Q8IYN6 164 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 SIX5Q8N196 739 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 PRICKLE1Q96MT3 831 aaPredicted RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 NOX5Q96PH1 765 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 MAGEB5Q9BZ81 275 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 ISCUQ9H1K1 167 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 ECT2Q9H8V3 914 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 PIGVQ9NUD9 493 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 DUS2Q9NX74 493 aaKnown RBP13.65□□□□□ -0.22
CHFR-216ENST00000538235 ADAM22Q9P0K1 906 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 CEP83Q9Y592 693 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 SNX10Q9Y5X0 201 aa13.65□□□□□ -0.22
CHFR-216ENST00000538235 E2F8A0AVK6 867 aa13.64□□□□□ -0.23
CHFR-216ENST00000538235 C2CD4BA6NLJ0 364 aa13.64□□□□□ -0.23
CHFR-216ENST00000538235 TRDMT1O14717 391 aaKnown RBP13.64□□□□□ -0.23
CHFR-216ENST00000538235 PI15O43692 258 aa13.64□□□□□ -0.23
CHFR-216ENST00000538235 GLI1P08151 1106 aa13.64□□□□□ -0.23
CHFR-216ENST00000538235 GLULP15104 373 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms