RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 TAC4Q86UU9 113 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 FAM131BQ86XD5 332 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 PSTKQ8IV42 348 aaKnown RBP12.2□□□□□ -0.46
SPARC-207ENST00000537849 CTAGE4Q8IX94 777 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 NOA1Q8NC60 698 aaKnown RBP12.2□□□□□ -0.46
SPARC-207ENST00000537849 KCTD6Q8NC69 237 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 HSPH1Q92598 858 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 PSMG2Q969U7 264 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
SPARC-207ENST00000537849 SNRNP25Q9BV90 132 aaKnown RBP12.2□□□□□ -0.46
SPARC-207ENST00000537849 HEMGNQ9BXL5 484 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 LRRC3Q9BY71 257 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 OSBPL8Q9BZF1 889 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 SMOC2Q9H3U7 446 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 TMPRSS4Q9NRS4 437 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 KLHL11Q9NVR0 708 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 DDIT4Q9NX09 232 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.2□□□□□ -0.46
SPARC-207ENST00000537849 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
SPARC-207ENST00000537849 hCG_1818297A0A087WSY0 165 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 LRRD1A4D1F6 860 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 IRAK2O43187 625 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 CTIFO43310 598 aaKnown RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 LPXNO60711 386 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 GLUD1P00367 558 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 KRT10P13645 584 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 GBP1P32455 592 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 TERF1P54274 439 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 CDH6P55285 790 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 KLF1Q13351 362 aaPredicted RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 PLD1Q13393 1074 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 DPYSL3Q14195 570 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 PDK2Q15119 407 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 CLUL1Q15846 466 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 PPP2R5EQ16537 467 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 DPYSL2Q16555 572 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 TDHQ8IZJ6 230 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 PDZD8Q8NEN9 1154 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 RNF139Q8WU17 664 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 TSC1Q92574 1164 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 NTAN1Q96AB6 310 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 RPGRIP1Q96KN7 1286 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 NAP1L3Q99457 506 aaPredicted RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 FAM204AQ9H8W3 233 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 PCDH18Q9HCL0 1135 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 RBM12Q9NTZ6 932 aaKnown RBP12.19□□□□□ -0.46
SPARC-207ENST00000537849 TMEM51Q9NW97 253 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 NUP205Q92621 2012 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 OBSL1O75147 1896 aa12.19□□□□□ -0.46
SPARC-207ENST00000537849 EFCAB8A8MWE9 144 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 KCNU1A8MYU2 1149 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ZNF487B1APH4 448 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 KRIT1O00522 736 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
SPARC-207ENST00000537849 CSPG5O95196 566 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 C8AP07357 584 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 EPCAMP16422 314 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPARC-207ENST00000537849 CETN2P41208 172 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 PPP3CCP48454 512 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 AIF1P55008 147 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 C2orf54Q08AI8 447 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 SCAPQ12770 1279 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 VEPH1Q14D04 833 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ZFYVE27Q5T4F4 411 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ADAT2Q7Z6V5 191 aaKnown RBP12.18□□□□□ -0.46
SPARC-207ENST00000537849 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ITIH5Q86UX2 942 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 VSIG1Q86XK7 387 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 CCDC50Q8IVM0 306 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 PYROXD2Q8N2H3 581 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 ARNTL2Q8WYA1 636 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 FAF2Q96CS3 445 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 RNF157Q96PX1 679 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
SPARC-207ENST00000537849 DHX35Q9H5Z1 703 aaKnown RBP12.18□□□□□ -0.46
SPARC-207ENST00000537849 WDCPQ9H6R7 721 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 CCSER2Q9H7U1 834 aa12.18□□□□□ -0.46
SPARC-207ENST00000537849 SLC28A3Q9HAS3 691 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms