RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 KRT16P08779 473 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 ARF4P18085 180 aaPredicted RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 KDELR1P24390 212 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 YWHAQP27348 245 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 TUBP50607 506 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 ILF2Q12905 390 aaKnown RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 BMPR2Q13873 1038 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 DUSP28Q4G0W2 176 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNC-211ENST00000537320 ZSWIM2Q8NEG5 633 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 BSNDQ8WZ55 320 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 YY1AP1Q9H869 796 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 PIH1D1Q9NWS0 290 aaKnown RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 SAE1Q9UBE0 346 aaPredicted RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 NUDT5Q9UKK9 219 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 B2RBV5 119 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 SP3Q02447 781 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 BTG3Q14201 252 aaPredicted RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 ATP13A4Q4VNC1 1196 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 MARC1Q5VT66 337 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 AGGF1Q8N302 714 aaeCLIP11.73□□□□□ -0.53
TNC-211ENST00000537320 PPTC7Q8NI37 304 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 KAT2BQ92831 832 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 SHCBP1LQ9BZQ2 653 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 ADGRA2Q96PE1 1338 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 A0A0B4J269 797 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 AIM2O14862 343 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 CABYRO75952 493 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 APOA4P06727 396 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 GLRBP48167 497 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 MARCKSL1P49006 195 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 KPNA1P52294 538 aaPredicted RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 DNAL1Q4LDG9 190 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 AENQ8WTP8 325 aaKnown RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 SERPINB11Q96P15 392 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 MRPL1Q9BYD6 325 aaKnown RBP11.73□□□□□ -0.53
TNC-211ENST00000537320 DCDC2Q9UHG0 476 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 SLIT2O94813 1529 aa11.73□□□□□ -0.53
TNC-211ENST00000537320 PRPF4O43172 522 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNC-211ENST00000537320 SRP72O76094 671 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNC-211ENST00000537320 SSTR1P30872 391 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 SERPINB8P50452 374 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 NOMO3P69849 1222 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 FAM110CQ1W6H9 321 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 AGAP9Q5VTM2 703 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 DTX3LQ8TDB6 740 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 SEMA4DQ92854 862 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 LPPQ93052 612 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 THTPAQ9BU02 230 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 SMPD4Q9NXE4 827 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 TPH1P17752 444 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 PTPN7P35236 360 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 NR2C2P49116 596 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 SCNN1BP51168 640 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 RHOAP61586 193 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 MPP3Q13368 585 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNC-211ENST00000537320 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 ST13P4Q8IZP2 240 aaPredicted RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 TRMT6Q9UJA5 497 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 NCANO14594 1321 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 NFKBIEO00221 500 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 RAMP2O60895 175 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 RBL1P28749 1068 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 CPA2P48052 419 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 PTK2BQ14289 1009 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 POU6F1Q14863 301 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 FAM183BPQ6ZVS7 135 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 PRPF39Q86UA1 669 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 TKTL2Q9H0I9 626 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 DPP7Q9UHL4 492 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 RUVBL2Q9Y230 463 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 RNF103O00237 685 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 O00370 1275 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 NPR3P17342 541 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 MGAT5Q09328 741 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 MAGEB18Q96M61 343 aa11.72□□□□□ -0.53
TNC-211ENST00000537320 CDK5RAP1Q96SZ6 601 aaKnown RBP11.72□□□□□ -0.53
TNC-211ENST00000537320 UBXN6Q9BZV1 441 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms