RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 CAPN8A6NHC0 703 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 FAM227AF5H4B4 570 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 ERC2O15083 957 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 GRIA3P42263 894 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 SLC11A2P49281 568 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 EIF4A1P60842 406 aaKnown RBP6.52□□□□□ -1.37
CLIP1-207ENST00000536634 FKBP1BP68106 108 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 TAF7Q15545 349 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-207ENST00000536634 STRIP1Q5VSL9 837 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 ADGRG3Q86Y34 549 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 IL31RAQ8NI17 732 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 CELF1Q92879 486 aaKnown RBP6.52□□□□□ -1.37
CLIP1-207ENST00000536634 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-207ENST00000536634 KLC4Q9NSK0 619 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 LAMB1P07942 1786 aa6.52□□□□□ -1.37
CLIP1-207ENST00000536634 ZNF609O15014 1411 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 LINC00473A8K010 186 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 VSTM5A8MXK1 200 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 H0YGN5 161 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 PPM1DO15297 605 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 ATXN1LP0C7T5 689 aaKnown RBP6.51□□□□□ -1.37
CLIP1-207ENST00000536634 SP2Q02086 613 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 EIF2B5Q13144 721 aaKnown RBP6.51□□□□□ -1.37
CLIP1-207ENST00000536634 IQCB1Q15051 598 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 C14orf80Q86SX3 495 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 KBTBD7Q8WVZ9 684 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 FKBP10Q96AY3 582 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 C22orf23Q9BZE7 217 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 KLK15Q9H2R5 256 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 L1RE1Q9UN81 338 aa6.51□□□□□ -1.37
CLIP1-207ENST00000536634 BTN3A1O00481 513 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 TBX3O15119 743 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 PHGDHO43175 533 aaKnown RBP6.5□□□□□ -1.37
CLIP1-207ENST00000536634 C1QL1O75973 258 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 VIPR2P41587 438 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 CACNA2D1P54289 1103 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 LOXL3P58215 753 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 GRM3Q14832 879 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 CNN3Q15417 329 aaKnown RBP6.5□□□□□ -1.37
CLIP1-207ENST00000536634 FBXO42Q6P3S6 717 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 APOA5Q6Q788 366 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 LAYNQ6UX15 382 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 TBC1D16Q8TBP0 767 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 RFKQ969G6 155 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 DPH1Q9BZG8 443 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 MYOZ2Q9NPC6 264 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 ASB6Q9NWX5 421 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 SERTAD3Q9UJW9 196 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 ST3GAL5Q9UNP4 418 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 SSX2IPQ9Y2D8 614 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 TMX2Q9Y320 296 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 DNAH12Q6ZR08 3092 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 SH3TC1Q8TE82 1336 aa6.5□□□□□ -1.37
CLIP1-207ENST00000536634 ZSWIM8A7E2V4 1837 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 A0A087WWL8 130 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 CFAP69A5D8W1 941 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 TMEM233B4DJY2 109 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 MYO1FO00160 1098 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 HTATSF1O43719 755 aaKnown RBP6.49□□□□□ -1.37
CLIP1-207ENST00000536634 THP07101 528 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 NR2F6P10588 404 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 PCSK6P29122 969 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-207ENST00000536634 SREBF2Q12772 1141 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 CTBP1Q13363 440 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 PRKG1Q13976 671 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 TBCCQ15814 346 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 ARHGAP40Q5TG30 622 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 ZNF783Q6ZMS7 281 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 RD3Q7Z3Z2 195 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 ZNF280BQ86YH2 543 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 SLC15A4Q8N697 577 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 BOLLQ8N9W6 283 aaKnown RBP6.49□□□□□ -1.37
CLIP1-207ENST00000536634 TTC8Q8TAM2 541 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 MAML1Q92585 1016 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 ANKS1AQ92625 1134 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 ZNF333Q96JL9 665 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 PBKQ96KB5 322 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 PTDSS2Q9BVG9 487 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 MXD3Q9BW11 206 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 SMURF2Q9HAU4 748 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 TRMT112Q9UI30 125 aaKnown RBP6.49□□□□□ -1.37
CLIP1-207ENST00000536634 TTC28Q96AY4 2481 aa6.49□□□□□ -1.37
CLIP1-207ENST00000536634 SSC5DA1L4H1 1573 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 CCDC151A5D8V7 595 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 hCG_1984214I3L0E3 225 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 ERBB2P04626 1255 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 EIF2S2P20042 333 aaKnown RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 SLC7A1P30825 629 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 GALEQ14376 348 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 ZIK1Q3SY52 487 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 ICE2Q659A1 982 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 RGS7BPQ6MZT1 257 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-207ENST00000536634 MAVSQ7Z434 540 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 FMNL3Q8IVF7 1028 aa6.48□□□□□ -1.37
CLIP1-207ENST00000536634 FAM156AQ8NDB6 213 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms