RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
PRKDC-207ENST00000536483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKDC-207ENST00000536483 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
PRKDC-207ENST00000536483 WDFY3Q8IZQ1 3526 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 O00370 1275 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 MAP3K13O43283 966 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 TLR5O60602 858 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 ADAM23O75077 832 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 TOP3BO95985 862 aaKnown RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 VDRP11473 427 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 PTGER3P43115 390 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 ZNF132P52740 706 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 STILQ15468 1287 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 CNGA2Q16280 664 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 SGO2Q562F6 1265 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 TRIM61Q5EBN2 209 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 HTR3DQ70Z44 454 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 PGBD3Q8N328 593 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 SPACA7Q96KW9 195 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 KLF16Q9BXK1 252 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 CCSER2Q9H7U1 834 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
PRKDC-207ENST00000536483 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 RALYQ9UKM9 306 aaKnown RBP13.08□□□□□ -0.32
PRKDC-207ENST00000536483 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 TBC1D3BA6NDS4 549 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 XPO1O14980 1071 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 CEACAM1P13688 526 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 CSRP1P21291 193 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 ATP5C1P36542 298 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 TNFRSF4P43489 277 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 SLC8A3P57103 927 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 GAD2Q05329 585 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 MEA1Q16626 185 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 UNQ6494/PRO21346Q6UXR6 183 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 ENOSF1Q7L5Y1 443 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 SCD5Q86SK9 330 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 PHTF2Q8N3S3 785 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 DEFB124Q8NES8 71 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 NUSAP1Q9BXS6 441 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 NUP62CLQ9H1M0 184 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 EVLQ9UI08 416 aaPredicted RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 WASF3Q9UPY6 502 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
PRKDC-207ENST00000536483 ASCC3Q8N3C0 2202 aaKnown RBP13.07□□□□□ -0.32
PRKDC-207ENST00000536483 MYO18AQ92614 2054 aaKnown RBP13.06□□□□□ -0.32
PRKDC-207ENST00000536483 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-207ENST00000536483 CYP26A1O43174 497 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 TULP3O75386 442 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 SETSIPP0DME0 302 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 MAPK8P45983 427 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 PLA2G4AP47712 749 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
PRKDC-207ENST00000536483 BCAT1P54687 386 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 BST2Q10589 180 aaKnown RBP13.06□□□□□ -0.32
PRKDC-207ENST00000536483 LMAN2Q12907 356 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 SYT12Q8IV01 421 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 ETFBKMTQ8IXQ9 262 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 SLC35F5Q8WV83 523 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 WBP2Q969T9 261 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
PRKDC-207ENST00000536483 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
PRKDC-207ENST00000536483 A0A1W2PQH9 124 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 TRIM24O15164 1050 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 HOXC11O43248 304 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-207ENST00000536483 IRF1P10914 325 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 RARGP13631 454 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ENGP17813 658 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ITPKAP23677 461 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 WASP42768 502 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 PDE4CQ08493 712 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 LRMPQ12912 555 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 BYSLQ13895 437 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms