RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DCLK3Q9C098 648 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 XPO4Q9C0E2 1151 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 SYNCQ9H7C4 482 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 POPDC2Q9HBU9 364 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 TRDMT1O14717 391 aaKnown RBP23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 CHRNB1P11230 501 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 AMPD2Q01433 879 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 SLC6A3Q01959 620 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 EFHC1Q5JVL4 640 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 SYPL2Q5VXT5 272 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 E4F1Q66K89 784 aaPredicted RBP23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 C18orf8Q96DM3 657 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 SLC2A13Q96QE2 648 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 NUP58Q9BVL2 599 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 FBRSL1Q9HCM7 1045 aaKnown RBP23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 SPHK2Q9NRA0 654 aa23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 AGO1Q9UL18 857 aaKnown RBP23.72■■□□□ 1.39
SFSWAP-204ENST00000535399 ADH1CP00326 375 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 IGLV3-27P01718 113 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 CCDC172P0C7W6 258 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 ADH5P11766 374 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 OPRD1P41143 372 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 GALK1P51570 392 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 TMEM196Q5HYL7 178 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 TOGARAM2Q6ZUX3 1019 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 SLC26A9Q7LBE3 791 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 TAC4Q86UU9 113 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 XYLT1Q86Y38 959 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 TMEM25Q86YD3 366 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 ZDHHC17Q8IUH5 632 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 DTWD2Q8NBA8 298 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 ZNF397Q8NF99 534 aaPredicted RBP23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 OLIG1Q8TAK6 271 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 AGPAT1Q99943 283 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 SYT11Q9BT88 431 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 AIPL1Q9NZN9 384 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 ZNF510Q9Y2H8 683 aa23.71■■□□□ 1.39
SFSWAP-204ENST00000535399 A0A1W2PQJ5 194 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 CAPN9O14815 690 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 NCAM2O15394 837 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 HOXC11O43248 304 aaPredicted RBP23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 HSF2BPO75031 334 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 GRAP2O75791 330 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 UNGP13051 313 aaPredicted RBP23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 RPS9P46781 194 aaKnown RBP23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 NUBP1P53384 320 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 ASIC2Q16515 512 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 CLEC16AQ2KHT3 1053 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 C2CD6Q53TS8 623 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 FSTL4Q6MZW2 842 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 DENND1CQ8IV53 801 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 DEFB106AQ8N104 65 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 LMAN1LQ9HAT1 526 aa23.7■■□□□ 1.38
SFSWAP-204ENST00000535399 IGLV3-25P01717 112 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 COL9A1P20849 921 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 MMP8P22894 467 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 SCNN1AP37088 669 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 PITX1P78337 314 aaPredicted RBP23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 GAD2Q05329 585 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 NNTQ13423 1086 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 CCINQ13939 588 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 SFMBT2Q5VUG0 894 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 FAM217AQ8IXS0 508 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 MSANTD4Q8NCY6 345 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 SLC30A5Q8TAD4 765 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 ADAM32Q8TC27 787 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 CD101Q93033 1021 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 SERPINB11Q96P15 392 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 P2RY13Q9BPV8 354 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 RBM12Q9NTZ6 932 aaKnown RBP23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 RAPGEFL1Q9UHV5 662 aa23.69■■□□□ 1.38
SFSWAP-204ENST00000535399 ITIH6Q6UXX5 1313 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 CBFA2T2O43439 604 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 GALR2O43603 387 aaPredicted RBP23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 DAB1O75553 588 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 TPM3P06753 285 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 PRKCIP41743 596 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 MAGEA9P43362 315 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 HARS2P49590 506 aaKnown RBP23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 TBX4P57082 545 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 CENPCQ03188 943 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 RING1Q06587 406 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 GRSF1Q12849 480 aaKnown RBP eCLIP23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 DCAF6Q58WW2 860 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 MMS22LQ6ZRQ5 1243 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 C12orf40Q86WS4 652 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 ETFBKMTQ8IXQ9 262 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 P2RY11Q96G91 374 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 SLC39A13Q96H72 371 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 FCRL2Q96LA5 508 aaPredicted RBP23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 CHRDQ9H2X0 955 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 MARK1Q9P0L2 795 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 KMT2EQ8IZD2 1858 aa23.68■■□□□ 1.38
SFSWAP-204ENST00000535399 IRAK2O43187 625 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 TRUB2O95900 331 aaKnown RBP23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 SLC6A11P48066 632 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 PTP4A2Q12974 167 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 EIF4EBP2Q13542 120 aaPredicted RBP23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 DGKKQ5KSL6 1271 aa23.67■■□□□ 1.38
SFSWAP-204ENST00000535399 TPGS1Q6ZTW0 290 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms