RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SAYSD1Q9NPB0 183 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 FETUBQ9UGM5 382 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 HEY1Q9Y5J3 304 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 TLDC2A0PJX2 215 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 YJEFN3A6XGL0 299 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 E7ENQ6 273 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 E7ESA3 106 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 ATP2A2P16615 1042 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 HPDP32754 393 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 CYP2C18P33260 490 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 HCAR3P49019 387 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 CENPFP49454 3210 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 NDUFV1P49821 464 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 NR1H3Q13133 447 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 RASA2Q15283 850 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 C1orf228Q6PIY5 440 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 MRPL9Q9BYD2 267 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 CWC15Q9P013 229 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 I3L4J1 428 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 KCNN4O15554 427 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 NCAM1P13591 858 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
BEST1-208ENST00000534553 BDNFP23560 247 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 MAGEA6P43360 314 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 ATP1A2P50993 1020 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 BASP1P80723 227 aaKnown RBP13.89□□□□□ -0.19
BEST1-208ENST00000534553 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
BEST1-208ENST00000534553 OTUD1Q5VV17 481 aaPredicted RBP13.89□□□□□ -0.19
BEST1-208ENST00000534553 NPNTQ6UXI9 565 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 TDRPQ86YL5 185 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 OR10T2Q8NGX3 314 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 SLC7A14Q8TBB6 771 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 RNF139Q8WU17 664 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 QKIQ96PU8 341 aaKnown RBP eCLIP13.89□□□□□ -0.19
BEST1-208ENST00000534553 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 USP29Q9HBJ7 922 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 LGALS13Q9UHV8 139 aa13.89□□□□□ -0.19
BEST1-208ENST00000534553 E7EVH7 732 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 NRP1O14786 923 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 NCAM2O15394 837 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 GCATO75600 419 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 SPAG6O75602 509 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 STK10O94804 968 aaKnown RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 DDHD2O94830 711 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 USP17L7P0C7H9 530 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 ADRA1BP35368 520 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 MMP13P45452 471 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 OR1G1P47890 313 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 ATXN1P54253 815 aaKnown RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 ELAVL2Q12926 359 aaKnown RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 NCBP2-AS2Q69YL0 99 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 EPS8L3Q8TE67 593 aaKnown RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 HASPINQ8TF76 798 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 BRD8Q9H0E9 1235 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 NAALADL1Q9UQQ1 740 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 ACTL7BQ9Y614 415 aa13.88□□□□□ -0.19
BEST1-208ENST00000534553 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
BEST1-208ENST00000534553 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 PPP1R12AO14974 1030 aaPredicted RBP13.87□□□□□ -0.19
BEST1-208ENST00000534553 FYNP06241 537 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 GOT1P17174 413 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 HTR7P34969 479 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 SMARCB1Q12824 385 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 PDIA2Q13087 525 aaKnown RBP13.87□□□□□ -0.19
BEST1-208ENST00000534553 NME3Q13232 169 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 PAFAH1B3Q15102 231 aaKnown RBP13.87□□□□□ -0.19
BEST1-208ENST00000534553 PDK1Q15118 436 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 SYPL2Q5VXT5 272 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
BEST1-208ENST00000534553 GPRIN1Q7Z2K8 1008 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 ZBED8Q8IZ13 594 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 PYROXD1Q8WU10 500 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 OLFM3Q96PB7 478 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 COLEC11Q9BWP8 271 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 ZCWPW1Q9H0M4 648 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 WDR6Q9NNW5 1121 aaKnown RBP13.87□□□□□ -0.19
BEST1-208ENST00000534553 ARHGEF4Q9NR80 690 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
BEST1-208ENST00000534553 PIGVQ9NUD9 493 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms