RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 MYO18AQ92614 2054 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 LNP1A1A4G5 178 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 PMM2O15305 246 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 ZBED1O96006 694 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 PENKP01210 267 aaPredicted RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 HMBSP08397 361 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 TBXAS1P24557 533 aaPredicted RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 CHKAP35790 457 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 PPP1R2P41236 205 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 WASP42768 502 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 DHPSP49366 369 aaPredicted RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 BCAT1P54687 386 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 YWHAEP62258 255 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 LRMPQ12912 555 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 BYSLQ13895 437 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 FYB2Q5VWT5 728 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 RNF43Q68DV7 783 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 CYP2U1Q7Z449 544 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 PGBD3Q8N328 593 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 NDRG1Q92597 394 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 BHMTQ93088 406 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 GABRG3Q99928 467 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 ULBP1Q9BZM6 244 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 MARCH2Q9P0N8 246 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 AGO1Q9UL18 857 aaKnown RBP18.27■□□□□ 0.52
VPS51-213ENST00000533827 KIAA1257Q9ULG3 409 aa18.27■□□□□ 0.52
VPS51-213ENST00000533827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 PATE3B3GLJ2 98 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 KHNYNO15037 678 aaKnown RBP18.26■□□□□ 0.51
VPS51-213ENST00000533827 MAP3K13O43283 966 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 VDRP11473 427 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 CD19P15391 556 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 BMP6P22004 513 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 CORO1AP31146 461 aaKnown RBP18.26■□□□□ 0.51
VPS51-213ENST00000533827 PKDCCQ504Y2 493 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 SPDYCQ5MJ68 293 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 TTI2Q6NXR4 508 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 FOXR2Q6PJQ5 311 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 LPCAT2Q7L5N7 544 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 TMEFF1Q8IYR6 380 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 UBA3Q8TBC4 463 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 LSM14BQ9BX40 385 aaKnown RBP18.26■□□□□ 0.51
VPS51-213ENST00000533827 HESX1Q9UBX0 185 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
VPS51-213ENST00000533827 SLC27A6Q9Y2P4 619 aa18.26■□□□□ 0.51
VPS51-213ENST00000533827 SLC12A8A0AV02 714 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 PPP1R3GB7ZBB8 358 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 O00370 1275 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 PTGER3P43115 390 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 SDE2Q6IQ49 451 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 KIAA1211LQ6NV74 962 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 RSRC2Q7L4I2 434 aaKnown RBP18.25■□□□□ 0.51
VPS51-213ENST00000533827 DENND1CQ8IV53 801 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 CPXM2Q8N436 756 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 LMO3Q8TAP4 145 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
VPS51-213ENST00000533827 KCTD13Q8WZ19 329 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 PIGKQ92643 395 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 CNTNAP3BQ96NU0 1288 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 CNTNAP3Q9BZ76 1288 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 LRRC4Q9HBW1 653 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 CALCOCO1Q9P1Z2 691 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 STRIP2Q9ULQ0 834 aa18.25■□□□□ 0.51
VPS51-213ENST00000533827 C4orf47A7E2U8 309 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 GFRA2O00451 464 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 PAEPP09466 180 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 NDUFV2P19404 249 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 MFAP3P55082 362 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 ADIGQ0VDE8 80 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 MORC3Q14149 939 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 TRIP4Q15650 581 aaPredicted RBP18.24■□□□□ 0.51
VPS51-213ENST00000533827 CCDC40Q4G0X9 1142 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 KLHL10Q6JEL2 608 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 LCLAT1Q6UWP7 414 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 FAM217AQ8IXS0 508 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 SCML4Q8N228 414 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 TFAP2BQ92481 460 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 PLD4Q96BZ4 506 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 NT5C1BQ96P26 610 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 OLA1Q9NTK5 396 aaKnown RBP18.24■□□□□ 0.51
VPS51-213ENST00000533827 TMEM74BQ9NUR3 256 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 EVLQ9UI08 416 aaPredicted RBP18.24■□□□□ 0.51
VPS51-213ENST00000533827 RAD54BQ9Y620 910 aa18.24■□□□□ 0.51
VPS51-213ENST00000533827 YJEFN3A6XGL0 299 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 WASH3PC4AMC7 463 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 E7ENQ6 273 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
VPS51-213ENST00000533827 CDX4O14627 284 aaPredicted RBP18.23■□□□□ 0.51
VPS51-213ENST00000533827 P4HA2O15460 535 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 GADD45BO75293 160 aaPredicted RBP18.23■□□□□ 0.51
VPS51-213ENST00000533827 IRX4P78413 519 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 GEN1Q17RS7 908 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 PEAR1Q5VY43 1037 aaPredicted RBP18.23■□□□□ 0.51
VPS51-213ENST00000533827 BSPRYQ5W0U4 402 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 TMEM270Q6UE05 265 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 SLC36A4Q6YBV0 504 aa18.23■□□□□ 0.51
VPS51-213ENST00000533827 ARMCX6Q7L4S7 300 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms