RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 FAM49AQ9H0Q0 323 aaPredicted RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 C10orf88Q9H8K7 445 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.43
ATM-222ENST00000533733 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.43
ATM-222ENST00000533733 TSC2P49815 1807 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 H3BRJ5 948 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 FBXO21O94952 628 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 ADRA1DP25100 572 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 NOS2P35228 1153 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 ETV4P43268 484 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 PSMC4P43686 418 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 MFSD10Q14728 455 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.43
ATM-222ENST00000533733 PPP6R3Q5H9R7 873 aaPredicted RBP12.39□□□□□ -0.43
ATM-222ENST00000533733 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 SH2D5Q6ZV89 423 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 CAND1Q86VP6 1230 aaKnown RBP12.39□□□□□ -0.43
ATM-222ENST00000533733 C7orf31Q8N865 590 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
ATM-222ENST00000533733 KBTBD7Q8WVZ9 684 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 ERP27Q96DN0 273 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 ANKRD27Q96NW4 1050 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 CSPG4P5Q96PW8 444 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 OSMRQ99650 979 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 EBNA1BP2Q99848 306 aaKnown RBP12.39□□□□□ -0.43
ATM-222ENST00000533733 TSSK1BQ9BXA7 367 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 MYLK2Q9H1R3 596 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 ETNK1Q9HBU6 452 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 SLC38A7Q9NVC3 462 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 RRN3Q9NYV6 651 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 GRID1Q9ULK0 1009 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 PIN4Q9Y237 131 aaKnown RBP12.39□□□□□ -0.43
ATM-222ENST00000533733 CHKBQ9Y259 395 aa12.39□□□□□ -0.43
ATM-222ENST00000533733 A0A0A0MRY4 1105 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 FAM159BA6NKW6 160 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 PIK3R2O00459 728 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 OPHN1O60890 802 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 DNAJC6O75061 913 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 C1QAP02745 245 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 APRTP07741 180 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 GLUD2P49448 558 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 PSEN2P49810 448 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 SNX17Q15036 470 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 PDK1Q15118 436 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 NLRP9Q7RTR0 991 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 IGDCC3Q8IVU1 814 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 ADGRF2Q8IZF7 708 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 ACMSDQ8TDX5 336 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 CDKL2Q92772 493 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 NT5C3BQ969T7 300 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 C18orf25Q96B23 403 aaPredicted RBP12.38□□□□□ -0.43
ATM-222ENST00000533733 MRRFQ96E11 262 aaKnown RBP12.38□□□□□ -0.43
ATM-222ENST00000533733 SPATA13Q96N96 652 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 DUSP16Q9BY84 665 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 BRD8Q9H0E9 1235 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 FZD10Q9ULW2 581 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
ATM-222ENST00000533733 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
ATM-222ENST00000533733 PPEF2O14830 753 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NCAM2O15394 837 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 DGKIO75912 1065 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 PAX3P23760 479 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 CA9Q16790 459 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 FAM91A1Q658Y4 838 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 BNIPLQ7Z465 357 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 B3GALNT2Q8NCR0 500 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 CFAP36Q96G28 342 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 SIKE1Q9BRV8 207 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
ATM-222ENST00000533733 SLCO1B3Q9NPD5 702 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 MTMR10Q9NXD2 777 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 NME7Q9Y5B8 376 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 USP3Q9Y6I4 520 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 I3L4J1 428 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 BIRC5O15392 142 aa12.37□□□□□ -0.43
ATM-222ENST00000533733 KPNA6O60684 536 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms