RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 LRRC49Q8IUZ0 686 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ZBTB45Q96K62 511 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 VAT1Q99536 393 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 CORO1BQ9BR76 489 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 MLXIPLQ9NP71 852 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TBC1D14Q9P2M4 693 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TRHDEQ9UKU6 1024 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SYN3O14994 580 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 APOA4P06727 396 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 PLA2G4AP47712 749 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ARFIP2P53365 341 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 POU5F1Q01860 360 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SMTNL2Q2TAL5 461 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 CDKAL1Q5VV42 579 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ANGPTL8Q6UXH0 198 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 KIAA2013Q8IYS2 634 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ELMO2Q96JJ3 720 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TEX12Q9BXU0 123 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 THAP2Q9H0W7 228 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SCHIP1Q9P0W5 487 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ARL2BPQ9Y2Y0 163 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ANKRD63C9JTQ0 380 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 CCZ1BP86790 482 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 CCZ1P86791 482 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TEDDM1Q5T9Z0 273 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 HJURPQ8NCD3 748 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SMPD4Q9NXE4 827 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TRMT6Q9UJA5 497 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 DCTN4Q9UJW0 460 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TBC1D3BA6NDS4 549 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 VPS26AO75436 327 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 PMPCBO75439 489 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 PCDH8O95206 1070 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 ADH1CP00326 375 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 NR2C2P49116 596 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SLC13A5Q86YT5 568 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 LGI2Q8N0V4 545 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 RBM15Q96T37 977 aaKnown RBP eCLIP11.61□□□□□ -0.556e-7■■■■■ 28.6
AMBRA1-211ENST00000533727 ING2Q9H160 280 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SEPT3Q9UH03 358 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 SMG5Q9UPR3 1016 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 NEU2Q9Y3R4 380 aa11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 MAFBQ9Y5Q3 323 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-211ENST00000533727 OR1E1P30953 314 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 C11orf63Q6NUN7 778 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CLEC4DQ8WXI8 215 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 RHOBTB1O94844 696 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 TMED10P49755 219 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ABCE1P61221 599 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 NCAPHQ15003 741 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 BMT2Q1RMZ1 405 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 TMEM154Q6P9G4 183 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SPATA21Q7Z572 469 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 B3GALNT2Q8NCR0 500 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 C2orf15Q8WU43 125 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 LNPEPQ9UIQ6 1025 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 FBXL5Q9UKA1 691 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SNX5Q9Y5X3 404 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 HACD1B0YJ81 288 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CHRM3P20309 590 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 KCNA3P22001 575 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 GRB14Q14449 540 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 FAM46CQ5VWP2 391 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 AGGF1Q8N302 714 aaeCLIP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 RIBC1Q8N443 379 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SH2D3CQ8N5H7 860 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 TATDN2Q93075 761 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 THAP11Q96EK4 314 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SGSM3Q96HU1 749 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ULBP1Q9BZM6 244 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CASS4Q9NQ75 786 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 VAV3Q9UKW4 847 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 AFDNP55196 1824 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 PRR23AA6NEV1 266 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ATMINO43313 823 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 NDUFS2O75306 463 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 SOAT2O75908 522 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 RRM1P23921 792 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 LSP1P33241 339 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 HSPA9P38646 679 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 TUBP50607 506 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ZNF200P98182 395 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms