RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
PSMD13-213ENST00000533717 PPP2R5DQ14738 602 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 TRIP4Q15650 581 aaPredicted RBP16.27■□□□□ 0.2
PSMD13-213ENST00000533717 ANO4Q32M45 955 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 ZNF528Q3MIS6 628 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 C1orf131Q8NDD1 294 aaKnown RBP16.27■□□□□ 0.2
PSMD13-213ENST00000533717 FAM149B1Q96BN6 582 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 SPAG5Q96R06 1193 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 CPXM1Q96SM3 734 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 PNKPQ96T60 521 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 MARK1Q9P0L2 795 aa16.27■□□□□ 0.2
PSMD13-213ENST00000533717 RNF40O75150 1001 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 FYNP06241 537 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 NCAM1P13591 858 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 SOX5P35711 763 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 CHKAP35790 457 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 NBL1P41271 181 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 CXCL12P48061 93 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 SLC6A11P48066 632 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 HARS2P49590 506 aaKnown RBP16.26■□□□□ 0.19
PSMD13-213ENST00000533717 SNX16P57768 344 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 FILIP1LQ4L180 1135 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 TPGS1Q6ZTW0 290 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 BEND5Q7L4P6 421 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 DENND1CQ8IV53 801 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 TMEM35BQ8NCS4 154 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 DDX1Q92499 740 aaKnown RBP16.26■□□□□ 0.19
PSMD13-213ENST00000533717 EZH1Q92800 747 aaPredicted RBP16.26■□□□□ 0.19
PSMD13-213ENST00000533717 BBS2Q9BXC9 721 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
PSMD13-213ENST00000533717 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 TJP2Q9UDY2 1190 aa16.26■□□□□ 0.19
PSMD13-213ENST00000533717 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
PSMD13-213ENST00000533717 CHURC1-FNTBB4DL54 471 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 NEDD8-MDP1E9PL57 170 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 CAPN9O14815 690 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 MSI1O43347 362 aaKnown RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 ATG13O75143 517 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 GFPT2O94808 682 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 CAVIN2O95810 425 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 APODP05090 189 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 CDH5P33151 784 aaPredicted RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 STAT1P42224 750 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 YWHAZP63104 245 aaKnown RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 TPM4P67936 248 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 SATB1Q01826 763 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 PREPLQ4J6C6 727 aaPredicted RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 TSSK4Q6SA08 328 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 NOP9Q86U38 636 aaKnown RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 NAT16Q8N8M0 369 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 CCDC26Q8TAB7 109 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 EPS8L1Q8TE68 723 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 PHOX2BQ99453 314 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 POPDC2Q9HBU9 364 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 ARHGEF4Q9NR80 690 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 NAALADL1Q9UQQ1 740 aa16.25■□□□□ 0.19
PSMD13-213ENST00000533717 MYO18AQ92614 2054 aaKnown RBP16.25■□□□□ 0.19
PSMD13-213ENST00000533717 EML5Q05BV3 1969 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 K7EQS6 105 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 TEX33O43247 280 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 CACNG3O60359 315 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 TULP3O75386 442 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 KAT7O95251 611 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 PAPSS2O95340 614 aaPredicted RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 LSM8O95777 96 aaKnown RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 LATS1O95835 1130 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 IGLV3-27P01718 113 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 ERBB2P04626 1255 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 GLI1P08151 1106 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 TYRP14679 529 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 KDSRQ06136 332 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 RING1Q06587 406 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 EFHC1Q5JVL4 640 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 PKN3Q6P5Z2 889 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 ZC3H14Q6PJT7 736 aaKnown RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 FAM217AQ8IXS0 508 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 PHTF2Q8N3S3 785 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 RPLP0P6Q8NHW5 317 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 DQX1Q8TE96 717 aaKnown RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 FAM126AQ9BYI3 521 aaPredicted RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 SYNCQ9H7C4 482 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 ASNSD1Q9NWL6 643 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 DEC1Q9P2X7 70 aa16.24■□□□□ 0.19
PSMD13-213ENST00000533717 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
PSMD13-213ENST00000533717 PROB1E7EW31 1015 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms