RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CC2D1AQ6P1N0 951 aaPredicted RBP18.21■□□□□ 0.51
NXF1-216ENST00000533499 FGF14Q92915 247 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 CFAP57Q96MR6 1250 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 ARHGAP26Q9UNA1 814 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 TFR2Q9UP52 801 aa18.21■□□□□ 0.51
NXF1-216ENST00000533499 NUP210Q8TEM1 1887 aaPredicted RBP18.2■□□□□ 0.5
NXF1-216ENST00000533499 OLFM2O95897 454 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 TMEM253P0C7T8 217 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 DESP17661 470 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 PSMA2P25787 234 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 GSCP56915 257 aaPredicted RBP18.2■□□□□ 0.5
NXF1-216ENST00000533499 TBX4P57082 545 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 COG7P83436 770 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 ZP2Q05996 745 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 MSANTD2Q6P1R3 559 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 KLHDC10Q6PID8 442 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 SND1Q7KZF4 910 aaKnown RBP eCLIP18.2■□□□□ 0.5
NXF1-216ENST00000533499 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 ZNF276Q8N554 614 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 RSPRY1Q96DX4 576 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 TBCBQ99426 244 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 KLF16Q9BXK1 252 aaPredicted RBP18.2■□□□□ 0.5
NXF1-216ENST00000533499 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 KIF9Q9HAQ2 790 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
NXF1-216ENST00000533499 LSM7Q9UK45 103 aaKnown RBP18.2■□□□□ 0.5
NXF1-216ENST00000533499 HELZP42694 1942 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 TMEM110-MUSTN1A8MSY1 372 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 ARHGAP6O43182 974 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 MOCS2O96007 188 aaPredicted RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 CYP1A2P05177 515 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 TFE3P19532 575 aaPredicted RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 FCARP24071 287 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 NOP2P46087 812 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 KRT83P78385 493 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 CCZ1BP86790 482 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 CCZ1P86791 482 aaPredicted RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 DEUP1Q05D60 604 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 HTR4Q13639 388 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 C15orf59Q2T9L4 293 aaPredicted RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 TRNP1Q6NT89 227 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 BEND5Q7L4P6 421 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 DDX42Q86XP3 938 aaKnown RBP eCLIP18.19■□□□□ 0.5
NXF1-216ENST00000533499 ZNF564Q8TBZ8 553 aaPredicted RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 BPIFB1Q8TDL5 484 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 WBP2Q969T9 261 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 E2F7Q96AV8 911 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 RPP25Q9BUL9 199 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 PLA2G2FQ9BZM2 168 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 THG1LQ9NWX6 298 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 ANAPC7Q9UJX3 599 aa18.19■□□□□ 0.5
NXF1-216ENST00000533499 HBS1LQ9Y450 684 aaKnown RBP18.19■□□□□ 0.5
NXF1-216ENST00000533499 MYO10Q9HD67 2058 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 LOC730098B7Z3J9 87 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 LCA5LO95447 670 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 KPNA1P52294 538 aaPredicted RBP18.18■□□□□ 0.5
NXF1-216ENST00000533499 NAP1L1P55209 391 aaKnown RBP18.18■□□□□ 0.5
NXF1-216ENST00000533499 TRIP4Q15650 581 aaPredicted RBP18.18■□□□□ 0.5
NXF1-216ENST00000533499 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 CCDC14Q49A88 953 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 ZC3H12AQ5D1E8 599 aaKnown RBP18.18■□□□□ 0.5
NXF1-216ENST00000533499 VITQ6UXI7 678 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 ELSPBP1Q96BH3 223 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 BTBD6Q96KE9 485 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
NXF1-216ENST00000533499 NPY6RQ99463 290 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 TRIM7Q9C029 511 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 KCNK12Q9HB15 430 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 RRN3Q9NYV6 651 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 C5orf42Q9H799 3197 aa18.18■□□□□ 0.5
NXF1-216ENST00000533499 TMEM191CA6NGB0 347 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 IRAK2O43187 625 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 CCP110O43303 1012 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 ECI2O75521 394 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 STC2O76061 302 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 APOEP02649 317 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 GDI1P31150 447 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
NXF1-216ENST00000533499 IFNAR2P48551 515 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 HARS2P49590 506 aaKnown RBP18.17■□□□□ 0.5
NXF1-216ENST00000533499 ZNF143P52747 638 aaPredicted RBP18.17■□□□□ 0.5
NXF1-216ENST00000533499 ZXDBP98169 803 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 ZNF77Q15935 545 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 TJAP1Q5JTD0 557 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 SH3PXD2AQ5TCZ1 1133 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 SCYL2Q6P3W7 929 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 DENND1CQ8IV53 801 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 SLC35G2Q8TBE7 412 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 FAM172AQ8WUF8 416 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 PLD4Q96BZ4 506 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 ZFYVE19Q96K21 471 aa18.17■□□□□ 0.5
NXF1-216ENST00000533499 ZFRQ96KR1 1074 aaKnown RBP18.17■□□□□ 0.5
NXF1-216ENST00000533499 LRRC3BQ96PB8 259 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms