RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 RPLP0P6Q8NHW5 317 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 CCDC26Q8TAB7 109 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 GATA6Q92908 595 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 BICD1Q96G01 975 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 FBRSL1Q9HCM7 1045 aaKnown RBP8.68□□□□□ -1.02
NEDD8-207ENST00000533242 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 MED4Q9NPJ6 270 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 POLR3BQ9NW08 1133 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-207ENST00000533242 DMAC2Q9NW81 257 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 CCL26Q9Y258 94 aa8.68□□□□□ -1.02
NEDD8-207ENST00000533242 LNP1A1A4G5 178 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 F8VZ95 297 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 DCLK1O15075 740 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEDD8-207ENST00000533242 FAM189A1O60320 539 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 PPP1R37O75864 691 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 PIGRP01833 764 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-207ENST00000533242 HMGA1P17096 107 aaKnown RBP8.67□□□□□ -1.02
NEDD8-207ENST00000533242 SCP2P22307 547 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 GJA4P35212 333 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 FMO5P49326 533 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 NCKAP1LP55160 1127 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 GPS2Q13227 327 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 MAP9Q49MG5 647 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 CFAP221Q4G0U5 840 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 HSP90B2PQ58FF3 399 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 JADE1Q6IE81 842 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 DCP1BQ8IZD4 617 aaKnown RBP8.67□□□□□ -1.02
NEDD8-207ENST00000533242 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 MAB21L3Q8N8X9 362 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 MRPS31Q92665 395 aaKnown RBP8.67□□□□□ -1.02
NEDD8-207ENST00000533242 CD101Q93033 1021 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 KRT12Q99456 494 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 STRA6Q9BX79 667 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 TAS2R14Q9NYV8 317 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 KCND2Q9NZV8 630 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 NFU1Q9UMS0 254 aa8.67□□□□□ -1.02
NEDD8-207ENST00000533242 SRRM3A6NNA2 597 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TMCO5BA8MYB1 307 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 KCNK3O14649 394 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 RAD51CO43502 376 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 HEXIM1O94992 359 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 GAP43P17677 238 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 MCM3P25205 808 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 PAFAH1B1P43034 410 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 LIG4P49917 911 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 GUCY2DQ02846 1103 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 USP39Q53GS9 565 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CYP2U1Q7Z449 544 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 SLC30A5Q8TAD4 765 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 PLEKHO2Q8TD55 490 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CASKIN2Q8WXE0 1202 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 EZH1Q92800 747 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ARL8AQ96BM9 186 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 SYT11Q9BT88 431 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 PCIF1Q9H4Z3 704 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ECT2Q9H8V3 914 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 METTL14Q9HCE5 456 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 LCMT1Q9UIC8 334 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 FAM208BQ5VWN6 2430 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 SDK1Q7Z5N4 2213 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CEP192Q8TEP8 1941 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CCDC66A2RUB6 948 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 GOLGA6BA6NDN3 693 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CSH1P0DML2 217 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CSH2P0DML3 217 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 SPINK2P20155 84 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 GBP1P32455 592 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 PSMC2P35998 433 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 NOP2P46087 812 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 DGKEP52429 567 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 USP4Q13107 963 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 DRAP1Q14919 205 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TMEM132DQ14C87 1099 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TXNDC8Q6A555 127 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 LRRTM3Q86VH5 581 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 RASSF3Q86WH2 238 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 KLHL7Q8IXQ5 586 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TSTD1Q8NFU3 115 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 LMO3Q8TAP4 145 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 RIN3Q8TB24 985 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ZCCHC14Q8WYQ9 949 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ELMO3Q96BJ8 720 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 CBWD1Q9BRT8 395 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 AP1M1Q9BXS5 423 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 TMEM206Q9H813 350 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 GDF3Q9NR23 364 aa8.66□□□□□ -1.02
NEDD8-207ENST00000533242 DUS2Q9NX74 493 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 ABI2Q9NYB9 513 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 LARSQ9P2J5 1176 aaKnown RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 UXTQ9UBK9 157 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-207ENST00000533242 EVLQ9UI08 416 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms