RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FECHP22830 423 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 GDI1P31150 447 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 RFC1P35251 1148 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 HARS2P49590 506 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 GALCP54803 685 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 FCHO2Q0JRZ9 810 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 MAMLD1Q13495 774 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 MTF1Q14872 753 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 TRIP4Q15650 581 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZNF77Q15935 545 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 ARHGAP29Q52LW3 1261 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 HTR3DQ70Z44 454 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 H2AFVQ71UI9 128 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 EMC1Q8N766 993 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 PLD4Q96BZ4 506 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZNF653Q96CK0 615 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 PDLIM2Q96JY6 352 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 BRD9Q9H8M2 597 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 LUC7LQ9NQ29 371 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 TLR6Q9Y2C9 796 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 SCINQ9Y6U3 715 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 UNC80Q8N2C7 3258 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 MYH10P35580 1976 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 TCRBV5S1A1TA0A578 114 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 M0QYT0 321 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 CHADO15335 359 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 STC2O76061 302 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 F9P00740 461 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 PTMAP06454 111 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 DESP17661 470 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SDC4P31431 198 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 FLT3P36888 993 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 MAGEA1P43355 309 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 IFNAR2P48551 515 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SULT1E1P49888 294 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 TBX4P57082 545 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 NNTQ13423 1086 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 GRM2Q14416 872 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC25A52Q3SY17 297 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.533e-8■■□□□ 12.3
TRAPPC4-211ENST00000533012 TAC4Q86UU9 113 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 JOSD2Q8TAC2 188 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 ADAM32Q8TC27 787 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 RXFP2Q8WXD0 754 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 CTNNBL1Q8WYA6 563 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 IRF7Q92985 503 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 RNF34Q969K3 372 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 NT5C3BQ969T7 300 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 NPY6RQ99463 290 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 THAP2Q9H0W7 228 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 DDIT4Q9NX09 232 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC12A6Q9UHW9 1150 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 NENFQ9UMX5 172 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.53
TRAPPC4-211ENST00000533012 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 SYNJ2BP-COX16A0A087WUM0 186 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 C2CD4BA6NLJ0 364 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 MSI1O43347 362 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 NRDCO43847 1150 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 NDUFA10O95299 355 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 LCA5LO95447 670 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 GJB6O95452 261 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 IGLV3-25P01717 112 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 CYP1A2P05177 515 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 SLC2A3P11169 496 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 SRFP11831 508 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 GPD1P21695 349 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 CCR1P32246 355 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 RPL7AP62424 266 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 PFKPQ01813 784 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 RING1Q06587 406 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 USP4Q13107 963 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 NME3Q13232 169 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 PDGFRLQ15198 375 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 CCDC14Q49A88 953 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 NUGGCQ68CJ6 796 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 DENND1CQ8IV53 801 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 UBALD2Q8IYN6 164 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 ADGRG2Q8IZP9 1017 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 CSGALNACT1Q8TDX6 532 aa11.7□□□□□ -0.54
TRAPPC4-211ENST00000533012 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms