RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 UBOX5O94941 541 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 LDLRP01130 860 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 FYNP06241 537 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ANXA6P08133 673 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 FAM228BP0C875 321 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 MLH1P40692 756 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 LHX1P48742 406 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 PDZK1Q5T2W1 519 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 CYP4A22Q5TCH4 519 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ERAP2Q6P179 960 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 KYAT3Q6YP21 454 aaKnown RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ZNF483Q8TF39 744 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 PACSIN1Q9BY11 444 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 HMG20AQ9NP66 347 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 AAASQ9NRG9 546 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 KCND1Q9NSA2 647 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 BTBD7Q9P203 1132 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 A0A087X1B8 175 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 E9PBE3 544 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 PHGDHO43175 533 aaKnown RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 FSBPO95073 299 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 SGPL1O95470 568 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ITGB3P05106 788 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ICAM1P05362 532 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ATXN8OSP0DMR3 200 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 GP5P40197 560 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 SLC1A6P48664 564 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 MGAT5BQ3V5L5 792 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 SAMD4BQ5PRF9 694 aaKnown RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ZCCHC7Q8N3Z6 543 aaKnown RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 UCMAQ8WVF2 138 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 OXNAD1Q96HP4 312 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 SPRTNQ9H040 489 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 DDX20Q9UHI6 824 aaKnown RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 MCM8Q9UJA3 840 aa7.81□□□□□ -1.16
CTNND1-233ENST00000532787 INO80Q9ULG1 1556 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-233ENST00000532787 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 DNALI1O14645 258 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CTDNEP1O95476 244 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 STAG3L1P0CL83 205 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 RPL10AP62906 217 aaKnown RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CDH18Q13634 790 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 TMEM132BQ14DG7 1078 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 KCNT1Q5JUK3 1230 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 TTC27Q6P3X3 843 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 HERC6Q8IVU3 1022 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 MSL3Q8N5Y2 521 aaKnown RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 LZTR1Q8N653 840 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ATG16L2Q8NAA4 619 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ZNF398Q8TD17 642 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GDPD5Q8WTR4 605 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 MIEF2Q96C03 454 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 RNFT2Q96EX2 444 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 QKIQ96PU8 341 aaKnown RBP eCLIP7.8□□□□□ -1.162e-8■■□□□ 14.5
CTNND1-233ENST00000532787 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GPRC5DQ9NZD1 345 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 LNPEPQ9UIQ6 1025 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 USP18Q9UMW8 372 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 C15orf41Q9Y2V0 281 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ACTL7BQ9Y614 415 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GPR75-ASB3A0A0A6YYF3 556 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 FOXN3O00409 490 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GRAP2O75791 330 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 NPTXRO95502 500 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 FOSL2P15408 326 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GPC1P35052 558 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CDC73Q6P1J9 531 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ARHGAP22Q7Z5H3 698 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 RORBQ92753 470 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 MAGEB10Q96LZ2 347 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 YIPF2Q9BWQ6 316 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 DCLK3Q9C098 648 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ADPRHL2Q9NX46 363 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 PCDHA3Q9Y5H8 950 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 FAM25AB3EWG3 89 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 FAM25CB3EWG5 89 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 FAM25GB3EWG6 89 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 DDHD2O94830 711 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 HMBSP08397 361 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 MYL4P12829 197 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 SREBF1P36956 1147 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 STAT5AP42229 794 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CD151P48509 253 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CENPAP49450 140 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ZNF284Q2VY69 593 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CDC42EP5Q6NZY7 148 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 CASP12Q6UXS9 341 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 NEK10Q6ZWH5 1172 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 MICALL2Q8IY33 904 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 STK32AQ8WU08 396 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 SLC25A23Q9BV35 468 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 ADAM33Q9BZ11 813 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 SLITRK2Q9H156 845 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
CTNND1-233ENST00000532787 EPB41L4AQ9HCS5 686 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-233ENST00000532787 GDF3Q9NR23 364 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms