RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MIS12Q9H081 205 aa24.02■■□□□ 1.44
CAPN1-222ENST00000532285 VPS16Q9H269 839 aa24.02■■□□□ 1.44
CAPN1-222ENST00000532285 PCDHGC3Q9UN70 934 aa24.02■■□□□ 1.44
CAPN1-222ENST00000532285 MYO18AQ92614 2054 aaKnown RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 FRYLO94915 3013 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 RIF1Q5UIP0 2472 aaKnown RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 CACNG3O60359 315 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 TYRP14679 529 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 CLCN1P35523 988 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 FNTBP49356 437 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 HARS2P49590 506 aaKnown RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 SEC13P55735 322 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 BPIFB4P59827 614 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 MRPS21P82921 87 aaKnown RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 DMWDQ09019 674 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 MESP2Q0VG99 397 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 TRIP4Q15650 581 aaPredicted RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 C2orf27AQ580R0 203 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 TMEM110Q86TL2 294 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 DENND1CQ8IV53 801 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 FAM71AQ8IYT1 594 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 CAMKK1Q8N5S9 505 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 SUMF1Q8NBK3 374 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 ANKRD20A12PQ8NF67 263 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 EPC1Q9H2F5 836 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 SFMBT1Q9UHJ3 866 aa24.01■■□□□ 1.43
CAPN1-222ENST00000532285 AGO1Q9UL18 857 aaKnown RBP24.01■■□□□ 1.43
CAPN1-222ENST00000532285 CNR2P34972 360 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 TYRO3Q06418 890 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 RAPGEF1Q13905 1077 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 DRAP1Q14919 205 aaPredicted RBP24■■□□□ 1.43
CAPN1-222ENST00000532285 HEATR6Q6AI08 1181 aaKnown RBP24■■□□□ 1.43
CAPN1-222ENST00000532285 LSM14BQ9BX40 385 aaKnown RBP24■■□□□ 1.43
CAPN1-222ENST00000532285 LHX5Q9H2C1 402 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 CYTH4Q9UIA0 394 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 FHOD1Q9Y613 1164 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 FAM186AA6NE01 2351 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 EML5Q05BV3 1969 aa24■■□□□ 1.43
CAPN1-222ENST00000532285 CCDC163A0A0D9SF12 145 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 TBC1D3BA6NDS4 549 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 UCHL3P15374 230 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 KRT9P35527 623 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 DMC1Q14565 340 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 HSF5Q4G112 596 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-222ENST00000532285 GRAMD4Q6IC98 578 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 SLC47A2Q86VL8 602 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 WDR5BQ86VZ2 330 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 SFTPA1Q8IWL2 248 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 CPXM2Q8N436 756 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 TRIM62Q9BVG3 475 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 NAA15Q9BXJ9 866 aaKnown RBP23.99■■□□□ 1.43
CAPN1-222ENST00000532285 NAT10Q9H0A0 1025 aaKnown RBP23.99■■□□□ 1.43
CAPN1-222ENST00000532285 PLCB1Q9NQ66 1216 aa23.99■■□□□ 1.43
CAPN1-222ENST00000532285 DNAJC17Q9NVM6 304 aaKnown RBP23.99■■□□□ 1.43
CAPN1-222ENST00000532285 POLR3BQ9NW08 1133 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-222ENST00000532285 E5RJQ4 531 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 NCAM1P13591 858 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 PDCLQ13371 301 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 FKBP15Q5T1M5 1219 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 TERB1Q8NA31 727 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 KCNV2Q8TDN2 545 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 FAM149B1Q96BN6 582 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 LIMA1Q9UHB6 759 aaKnown RBP23.98■■□□□ 1.43
CAPN1-222ENST00000532285 MMP17Q9ULZ9 603 aa23.98■■□□□ 1.43
CAPN1-222ENST00000532285 PAPSS1O43252 624 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 LATS1O95835 1130 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 PENKP01210 267 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 PNMA6AP0CW24 399 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 CDK11BP21127 795 aaKnown RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 HOXC13P31276 330 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 KIR2DL1P43626 348 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 CAVIN1Q6NZI2 390 aaKnown RBP23.97■■□□□ 1.43
CAPN1-222ENST00000532285 BEND5Q7L4P6 421 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 FAM217AQ8IXS0 508 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 WDTC1Q8N5D0 677 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 BHMTQ93088 406 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 NOX5Q96PH1 765 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 STK33Q9BYT3 514 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 PLK2Q9NYY3 685 aa23.97■■□□□ 1.43
CAPN1-222ENST00000532285 MSI1O43347 362 aaKnown RBP23.96■■□□□ 1.43
CAPN1-222ENST00000532285 CYBBP04839 570 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 FYNP06241 537 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 TIE1P35590 1138 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 DGKGP49619 791 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 COPB1P53618 953 aaKnown RBP23.96■■□□□ 1.43
CAPN1-222ENST00000532285 SNX16P57768 344 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 C10orf76Q5T2E6 689 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 EMC10Q5UCC4 262 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 FYB2Q5VWT5 728 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 PASD1Q8IV76 773 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 UNC45BQ8IWX7 931 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 CCDC33Q8N5R6 958 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 IL17RCQ8NAC3 791 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 PPP1R13BQ96KQ4 1090 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 HHIPQ96QV1 700 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 FBXO10Q9UK96 956 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 RAB23Q9ULC3 237 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 SMG5Q9UPR3 1016 aaKnown RBP23.96■■□□□ 1.43
CAPN1-222ENST00000532285 CEP83Q9Y592 693 aa23.96■■□□□ 1.43
CAPN1-222ENST00000532285 PTPRZ1P23471 2315 aaPredicted RBP23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms