RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 SUSD6Q92537 303 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPB1-208ENST00000532088 HCFC1R1Q9NWW0 138 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 ZFP37Q9Y6Q3 630 aaPredicted RBP13.08□□□□□ -0.32
COPB1-208ENST00000532088 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.32
COPB1-208ENST00000532088 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 PIK3R2O00459 728 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 TLR5O60602 858 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 MOSPD3O75425 235 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 MYL4P12829 197 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 NNTQ13423 1086 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 ACAP1Q15027 740 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 KIAA1328Q86T90 577 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 FEZF2Q8TBJ5 459 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 NT5C3BQ969T7 300 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 FAM149B1Q96BN6 582 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 PIWIL1Q96J94 861 aaKnown RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 PACSIN1Q9BY11 444 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 ATXN3LQ9H3M9 355 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 TASP1Q9H6P5 420 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 METTL5Q9NRN9 209 aaKnown RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
COPB1-208ENST00000532088 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.07□□□□□ -0.32
COPB1-208ENST00000532088 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 STAP1Q9ULZ2 295 aa13.07□□□□□ -0.32
COPB1-208ENST00000532088 MRPS23Q9Y3D9 190 aaKnown RBP13.07□□□□□ -0.32
COPB1-208ENST00000532088 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 GOLGA8SH3BPF8 625 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 CAPN9O14815 690 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 FYNP06241 537 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 NCAM1P13591 858 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 RARGP13631 454 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 DESP17661 470 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 FSHRP23945 695 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
COPB1-208ENST00000532088 CCR2P41597 374 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 PTPN9P43378 593 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 KPNA1P52294 538 aaPredicted RBP13.06□□□□□ -0.32
COPB1-208ENST00000532088 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
COPB1-208ENST00000532088 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 NR1H3Q13133 447 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 MTA1Q13330 715 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 AGERQ15109 404 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 C2CD6Q53TS8 623 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 HFE2Q6ZVN8 426 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 DEFB106AQ8N104 65 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 NDRG1Q92597 394 aaKnown RBP13.06□□□□□ -0.32
COPB1-208ENST00000532088 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 NUP85Q9BW27 656 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 SMOC2Q9H3U7 446 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 C2orf16Q68DN1 1984 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 NOTCH4Q99466 2003 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 OBSL1O75147 1896 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 DENND4AQ7Z401 1863 aa13.06□□□□□ -0.32
COPB1-208ENST00000532088 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 CCP110O43303 1012 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 ZSCAN12O43309 604 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 KRT86O43790 486 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 ENDOD1O94919 500 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 F9P00740 461 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 IGLV3-25P01717 112 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 TCF3P15923 654 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 GPD1P21695 349 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 ATP5C1P36542 298 aaKnown RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 FLT3P36888 993 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 SLC7A9P82251 487 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 EIF4EBP2Q13542 120 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 CBX2Q14781 532 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 TAF5Q15542 800 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 SLC25A52Q3SY17 297 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 STRADAQ7RTN6 431 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 DNAAF5Q86Y56 855 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms