RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RTN2O75298 545 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 ADCY5O95622 1261 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 FAM228BP0C875 321 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 GDI1P31150 447 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 NOS2P35228 1153 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 MATKP42679 507 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 KPNA1P52294 538 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-206ENST00000531480 GOLGA8FQ08AF8 430 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 SIGLEC14Q08ET2 396 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 GOLGA8DPQ0D2H9 430 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 EML3Q32P44 896 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 TDRD12Q587J7 1177 aaKnown RBP15.1■□□□□ 0.01
CPSF1-206ENST00000531480 VPS36Q86VN1 386 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 MIB1Q86YT6 1006 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 PLD4Q96BZ4 506 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-206ENST00000531480 PGAP3Q96FM1 320 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-206ENST00000531480 SLC39A13Q96H72 371 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 NPY6RQ99463 290 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
CPSF1-206ENST00000531480 NACA2Q9H009 215 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 HPS4Q9NQG7 708 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 TMEM51Q9NW97 253 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 RRN3Q9NYV6 651 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 CFAP97Q9P2B7 532 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 TBC1D14Q9P2M4 693 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 IMPACTQ9P2X3 320 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 SFMBT1Q9UHJ3 866 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 STOML2Q9UJZ1 356 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 HCN4Q9Y3Q4 1203 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 SHISA7A6NL88 538 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 SLC9A3R1O14745 358 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 IRAK2O43187 625 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 LATS1O95835 1130 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 KLKB1P03952 638 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 GLULP15104 373 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 DEKP35659 375 aaKnown RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 EIF4A3P38919 411 aaKnown RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 SLC18A3Q16572 532 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 FAM102AQ5T9C2 384 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 OTUD1Q5VV17 481 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 PLEKHA7Q6IQ23 1121 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 TRNP1Q6NT89 227 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 TAC4Q86UU9 113 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 YAF2Q8IY57 180 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 ADGRG2Q8IZP9 1017 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 AZIN2Q96A70 460 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 SERPINB11Q96P15 392 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 PANX2Q96RD6 677 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 ADAM33Q9BZ11 813 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 BRD9Q9H8M2 597 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 SEPT11Q9NVA2 429 aaKnown RBP15.09■□□□□ 0.01
CPSF1-206ENST00000531480 RASAL2Q9UJF2 1139 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 TLR6Q9Y2C9 796 aa15.09■□□□□ 0.01
CPSF1-206ENST00000531480 F5P12259 2224 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 SLC12A8A0AV02 714 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 OTOL1A6NHN0 477 aaPredicted RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 SIGLEC16A6NMB1 481 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 GFRA2O00451 464 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 CAPN9O14815 690 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 GPR37L1O60883 481 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 GRAP2O75791 330 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 ENDOD1O94919 500 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 FTLP02792 175 aaPredicted RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 FLT3P36888 993 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 PITX1P78337 314 aaPredicted RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 TSR1Q2NL82 804 aaKnown RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 DCAF6Q58WW2 860 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 IER5LQ5T953 404 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 CC2D1AQ6P1N0 951 aaPredicted RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 ATP2A3Q93084 1043 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 CHFRQ96EP1 664 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 ZFYVE19Q96K21 471 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 FCRL2Q96LA5 508 aaPredicted RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 CHP1Q99653 195 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 DCLK3Q9C098 648 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 LINC00597Q9H2U6 94 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 ZNHIT6Q9NWK9 470 aaKnown RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 DUS2Q9NX74 493 aaKnown RBP15.08■□□□□ 0
CPSF1-206ENST00000531480 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.08■□□□□ 0
CPSF1-206ENST00000531480 ZNF510Q9Y2H8 683 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 SH3BP1Q9Y3L3 701 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 MYOFQ9NZM1 2061 aa15.08■□□□□ 0
CPSF1-206ENST00000531480 C2CD4BA6NLJ0 364 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 MSI1O43347 362 aaKnown RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 MYBL1P10243 752 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 RRM1P23921 792 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 PTPN9P43378 593 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 TNK2Q07912 1038 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 MAMLD1Q13495 774 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 RUNX3Q13761 415 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 SLC25A52Q3SY17 297 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 NUGGCQ68CJ6 796 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 ALKBH5Q6P6C2 394 aaKnown RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 TRIM67Q6ZTA4 783 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms