RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 GFRA2O00451 464 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 CFIP05156 583 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 PROS1P07225 676 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 SERPINF2P08697 491 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 RALAP11233 206 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 KRT39Q6A163 491 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 TTC39CQ8N584 583 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 CEP76Q8TAP6 659 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 CDK5RAP1Q96SZ6 601 aaKnown RBP13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 GOLPH3LQ9H4A5 285 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 PLK2Q9NYY3 685 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 CYP8B1Q9UNU6 501 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 RAD54BQ9Y620 910 aa13.46□□□□□ -0.25
TM9SF1-211ENST00000531406 ZFHX4Q86UP3 3567 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 TOP3BO95985 862 aaKnown RBP13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 PENKP01210 267 aaPredicted RBP13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 SPINK2P20155 84 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 RAD23BP54727 409 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 COG7P83436 770 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 GFPT1Q06210 699 aaPredicted RBP13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 EFEMP1Q12805 493 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC41A1Q8IVJ1 513 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC4A11Q8NBS3 891 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 EEF2KMTQ96G04 330 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 TMEM176AQ96HP8 235 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 DCLK3Q9C098 648 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC6A17Q9H1V8 727 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 CAPN10Q9HC96 672 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 CISHQ9NSE2 258 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC27A6Q9Y2P4 619 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 STON1Q9Y6Q2 735 aa13.45□□□□□ -0.26
TM9SF1-211ENST00000531406 UPK3BL1B0FP48 263 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 UPK3BL2E5RIL1 263 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 STX10O60499 249 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ZNF202O95125 648 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 HMBSP08397 361 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 CORO1AP31146 461 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ATXN3P54252 364 aaPredicted RBP13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 SEMA3BQ13214 749 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 RABEPKQ7Z6M1 372 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ABCA7Q8IZY2 2146 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ARHGAP18Q8N392 663 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 TRIML1Q8N9V2 468 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 FBXL13Q8NEE6 735 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ZNF419Q96HQ0 510 aaPredicted RBP13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 MRGPRX1Q96LB2 322 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 ARID3AQ99856 593 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 GTPBP2Q9BX10 602 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC32A1Q9H598 525 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 AGO1Q9UL18 857 aaKnown RBP13.44□□□□□ -0.26
TM9SF1-211ENST00000531406 C1QTNF9BB2RNN3 333 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 ARHGAP33O14559 1287 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 CETN3O15182 167 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 C1QTNF9P0C862 333 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 CHKAP35790 457 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 MXI1P50539 228 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 MFAP3P55082 362 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 YWHAGP61981 247 aaKnown RBP eCLIP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 FUT11Q495W5 492 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 ARHGAP17Q68EM7 881 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 RSRC2Q7L4I2 434 aaKnown RBP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 PIGZQ86VD9 579 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 SMYD4Q8IYR2 804 aaPredicted RBP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 HDDC3Q8N4P3 179 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 ANKRD52Q8NB46 1076 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 TATDN2Q93075 761 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 HSPA12BQ96MM6 686 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 FAM124BQ9H5Z6 455 aaPredicted RBP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 MARCH2Q9P0N8 246 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 THAP10Q9P2Z0 257 aaPredicted RBP13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 STRIP2Q9ULQ0 834 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 CHD6Q8TD26 2715 aa13.43□□□□□ -0.26
TM9SF1-211ENST00000531406 FRYQ5TBA9 3013 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 SPAARA0A1B0GVQ0 90 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 GOLGA6L4A6NEF3 574 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 NPC1O15118 1278 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 NDUFS2O75306 463 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 ZBED1O96006 694 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 CYBBP04839 570 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 IL12RB1P42701 662 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 TKTL1P51854 596 aa13.42□□□□□ -0.26
TM9SF1-211ENST00000531406 SLC8A3P57103 927 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms