RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 HCN2Q9UL51 889 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 KIAA1257Q9ULG3 409 aa23.37■■□□□ 1.33
TRAPPC4-210ENST00000531290 C4orf47A7E2U8 309 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 PRRT4C9JH25 899 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 XPO1O14980 1071 aaKnown RBP23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 CISD3P0C7P0 127 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 TBXAS1P24557 533 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 CORO1AP31146 461 aaKnown RBP23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 PPP1R2P41236 205 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 BCAT1P54687 386 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 PDE4CQ08493 712 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 DAB2IPQ5VWQ8 1189 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 ARMCX6Q7L4S7 300 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 ACOX2Q99424 681 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 ULBP1Q9BZM6 244 aa23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 MBD1Q9UIS9 605 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC4-210ENST00000531290 A0A1W2PQF6 199 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 SLC12A8A0AV02 714 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 LNP1A1A4G5 178 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 VDRP11473 427 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 GABRG2P18507 467 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 PM20D1Q6GTS8 502 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 SLC36A4Q6YBV0 504 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 DENND1CQ8IV53 801 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 ELOA2Q8IYF1 753 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 IPO4Q8TEX9 1081 aaKnown RBP23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 CEP63Q96MT8 703 aa23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 IPO9Q96P70 1041 aaKnown RBP23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 AGO1Q9UL18 857 aaKnown RBP23.35■■□□□ 1.33
TRAPPC4-210ENST00000531290 SPTBN2O15020 2390 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 PATE3B3GLJ2 98 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 CYBBP04839 570 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 DPP6P42658 865 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 PTGER3P43115 390 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 FMO5P49326 533 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 BST2Q10589 180 aaKnown RBP23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 CETN1Q12798 172 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 CCDC40Q4G0X9 1142 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 LYSMD4Q5XG99 296 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 SYT12Q8IV01 421 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 UBA3Q8TBC4 463 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 RNF139Q8WU17 664 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 GABRG3Q99928 467 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 TMEM9BQ9NQ34 198 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 CALCOCO1Q9P1Z2 691 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 FBXO10Q9UK96 956 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 MAN1B1Q9UKM7 699 aa23.34■■□□□ 1.33
TRAPPC4-210ENST00000531290 TULP2O00295 520 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 GFRA2O00451 464 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 AP5Z1O43299 807 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 ZNF217O75362 1048 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 PENKP01210 267 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 IRX4P78413 519 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 RPL6Q02878 288 aaKnown RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 N4BP2L1Q5TBK1 243 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 FYB2Q5VWT5 728 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 KLHL10Q6JEL2 608 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 SIX6OS1Q8N1H7 587 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 NDRG1Q92597 394 aaKnown RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 NT5C1BQ96P26 610 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 NUSAP1Q9BXS6 441 aaKnown RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 OLA1Q9NTK5 396 aaKnown RBP23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 CACNA2D2Q9NY47 1150 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 SLC27A6Q9Y2P4 619 aa23.33■■□□□ 1.33
TRAPPC4-210ENST00000531290 KCNK5O95279 499 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 SETSIPP0DME0 302 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 HARS2P49590 506 aaKnown RBP23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 ADIGQ0VDE8 80 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 LMAN2Q12907 356 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 TRIM61Q5EBN2 209 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 PLD4Q96BZ4 506 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 ERLEC1Q96DZ1 483 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 EVLQ9UI08 416 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 PCDHB4Q9Y5E5 795 aa23.32■■□□□ 1.32
TRAPPC4-210ENST00000531290 O00370 1275 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 PMM2O15305 246 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 PAEPP09466 180 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 CD44P16070 742 aaKnown RBP23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 MFAP3P55082 362 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 E2F5Q15329 346 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 BSPRYQ5W0U4 402 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 KIAA1211LQ6NV74 962 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 TMEM270Q6UE05 265 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 CPXM2Q8N436 756 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 DEFB119Q8N690 84 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 DDI1Q8WTU0 396 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 UCMAQ8WVF2 138 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 KCTD13Q8WZ19 329 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 TMEM74BQ9NUR3 256 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 RAD54BQ9Y620 910 aa23.31■■□□□ 1.32
TRAPPC4-210ENST00000531290 BICDL2A1A5D9 508 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 WASH3PC4AMC7 463 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 NPC1O15118 1278 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 NDUFV2P19404 249 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 STARD3Q14849 445 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 TRIP4Q15650 581 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 PSAPL1Q6NUJ1 521 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 LCLAT1Q6UWP7 414 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 FMNL3Q8IVF7 1028 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 PPM1KQ8N3J5 372 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms