RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NYNRINQ9P2P1 1898 aaKnown RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 CREBBPQ92793 2442 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 A0A0B4J269 797 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 NEDD8-MDP1E9PL57 170 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 H0YCG3 227 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 K7ENM7 598 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 TERTO14746 1132 aaKnown RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 PFKFB2O60825 505 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 CDK4P11802 303 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 ANXA13P27216 316 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 PCSK1P29120 753 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 ADSSP30520 456 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 POLR2BP30876 1174 aaKnown RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 CTSKP43235 329 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 PPP3CCP48454 512 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 TPMTP51580 245 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 PSMC1P62191 440 aaKnown RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 VSTM1Q6UX27 236 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 SKAP1Q86WV1 359 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 TMEM25Q86YD3 366 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 CEP295NLQ96MC4 621 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 SYT15Q9BQS2 421 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 PCED1AQ9H1Q7 454 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 TM9SF3Q9HD45 589 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 OSGEPQ9NPF4 335 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 ITM2CQ9NQX7 267 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 ANKMY1Q9P2S6 941 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 SH3BP1Q9Y3L3 701 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 HEMK1Q9Y5R4 338 aaPredicted RBP8.74□□□□□ -1.01
CD44-232ENST00000531118 WASF2Q9Y6W5 498 aa8.74□□□□□ -1.01
CD44-232ENST00000531118 A0A1B0GTQ1 180 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 PP2D1A8MPX8 630 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 WASH3PC4AMC7 463 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 KCNK3O14649 394 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 HUS1O60921 280 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 LDOC1O95751 146 aaPredicted RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 ABL1P00519 1130 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 C1SP09871 688 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 IRF1P10914 325 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 BDNFP23560 247 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 OXTRP30559 389 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 ACOT2P49753 483 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 NOP14P78316 857 aaKnown RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 TAF10Q12962 218 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 ORC1Q13415 861 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 ZNF174Q15697 407 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 KCNT1Q5JUK3 1230 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 TTC38Q5R3I4 469 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 VASH1Q7L8A9 365 aaPredicted RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 GATAD2AQ86YP4 633 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 TOP6BLQ8N6T0 577 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 IGSF22Q8N9C0 903 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 WBP2Q969T9 261 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 SIPA1Q96FS4 1042 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 XPO6Q96QU8 1125 aaKnown RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 C6orf106Q9H6K1 298 aaPredicted RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 CRTAC1Q9NQ79 661 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 EHD2Q9NZN4 543 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 MARK1Q9P0L2 795 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 KCNG1Q9UIX4 513 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.73□□□□□ -1.01
CD44-232ENST00000531118 STON1Q9Y6Q2 735 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 DOPEY1Q5JWR5 2465 aa8.73□□□□□ -1.01
CD44-232ENST00000531118 TISP43B9A030 160 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 F8VP50 259 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 GABRDO14764 452 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 COCHO43405 550 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 TRAK2O60296 914 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 ITGB3P05106 788 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 TYRP14679 529 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 GLDCP23378 1020 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 LHX1P48742 406 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 DGKGP49619 791 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 COPAP53621 1224 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 VAC14Q08AM6 782 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 IFRD2Q12894 506 aaPredicted RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 TRIM29Q14134 588 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 ARID5BQ14865 1188 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 KRT79Q5XKE5 535 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 FAM124AQ86V42 546 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 TMPRSS6Q8IU80 811 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 LRRC52Q8N7C0 313 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 C1orf127Q8N9H9 656 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 SNRNP27Q8WVK2 155 aaKnown RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 RFFLQ8WZ73 363 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 PRCCQ92733 491 aaPredicted RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 HIC2Q96JB3 615 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 FAM84AQ96KN4 292 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.72□□□□□ -1.01
CD44-232ENST00000531118 BBS2Q9BXC9 721 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 TM6SF1Q9BZW5 370 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 LARSQ9P2J5 1176 aaKnown RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 MAGEC2Q9UBF1 373 aaPredicted RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 PTPRJQ12913 1337 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms