RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 COPB1P53618 953 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CACNA2D1P54289 1103 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MFAP3P55082 362 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GSCP56915 257 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC7A5Q01650 507 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 APBA1Q02410 837 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PWP1Q13610 501 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TAF12Q16514 161 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC5A9Q2M3M2 681 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SDHAF4Q5VUM1 108 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ARHGAP17Q68EM7 881 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GJB7Q6PEY0 223 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM270Q6UE05 265 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 DENND5BQ6ZUT9 1274 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GAREM2Q75VX8 874 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM35AQ86V20 835 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SAMD14Q8IZD0 417 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 NUP93Q8N1F7 819 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CCDC89Q8N998 374 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ANKRD20A12PQ8NF67 263 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC2A14Q8TDB8 520 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FRS2Q8WU20 508 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CHAC2Q8WUX2 184 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TCEAL4Q96EI5 215 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TRMT2BQ96GJ1 504 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SMARCD1Q96GM5 515 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MYADMQ96S97 322 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SMOQ99835 787 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MED10Q9BTT4 135 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GPR88Q9GZN0 384 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 IL21Q9HBE4 155 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF334Q9HCZ1 680 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SIX2Q9NPC8 291 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CASS4Q9NQ75 786 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM49BQ9NUQ9 324 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM30AQ9NV96 361 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GDE1Q9NZC3 331 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 EPS15L1Q9UBC2 864 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 APEX2Q9UBZ4 518 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 RSPH14Q9UHP6 348 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 RABGEF1Q9UJ41 708 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CDH7Q9ULB5 785 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PCDHB4Q9Y5E5 795 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TCF20Q9UGU0 1960 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ATP8B3O60423 1300 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM110-MUSTN1A8MSY1 372 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SMAD7O15105 426 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 NOL4O94818 638 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 BPNT1O95861 308 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MSL3P1P0C860 447 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GJA1P17302 382 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SP100P23497 879 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ANXA13P27216 316 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GABRR2P28476 465 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GDF10P55107 478 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SH3BGRP55822 239 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ADCY2Q08462 1091 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CNGA2Q16280 664 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PDCD2Q16342 344 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FKBP15Q5T1M5 1219 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 KLHDC7AQ5VTJ3 777 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 LRSAM1Q6UWE0 723 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CLEC20AQ6ZU45 233 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM150AQ86TG1 271 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 LUZP1Q86V48 1076 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 LAPTM4BQ86VI4 370 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MYLK4Q86YV6 388 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 NPAS3Q8IXF0 933 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TDRD5Q8NAT2 981 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ANKRD52Q8NB46 1076 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ZMIZ2Q8NF64 920 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GABPB2Q8TAK5 448 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GIMAP1Q8WWP7 306 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 NXPE3Q969Y0 559 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MCRS1Q96EZ8 462 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TRIM11Q96F44 468 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 TTLL2Q9BWV7 592 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 NAA15Q9BXJ9 866 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 DUSP16Q9BY84 665 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM126AQ9BYI3 521 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 UBXN6Q9BZV1 441 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF700Q9H0M5 742 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 DMAP1Q9NPF5 467 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PLCB1Q9NQ66 1216 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 IL37Q9NZH6 218 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MCM8Q9UJA3 840 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 DNAJC12Q9UKB3 198 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MAGED2Q9UNF1 606 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM92AA1XBS5 289 aa6.59□□□□□ -1.36
ATPAF1-209ENST00000529214 SOBPA7XYQ1 873 aa6.59□□□□□ -1.36
ATPAF1-209ENST00000529214 LGALS16A8MUM7 142 aa6.59□□□□□ -1.36
ATPAF1-209ENST00000529214 HHLA1C9JL84 531 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms